RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PRMT9Q6P2P2 845 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 ASPGQ86U10 573 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 METTL27Q8N6F8 245 aaPredicted RBP16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 MFSD9Q8NBP5 474 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 CAMKVQ8NCB2 501 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 SCYL1Q96KG9 808 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 C10orf90Q96M02 699 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 CATSPER2Q96P56 530 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 GPR78Q96P69 363 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 CD244Q9BZW8 370 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 GPRC5BQ9NZH0 403 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 TCFL5Q9UL49 500 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 CDC14AQ9UNH5 594 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 FER1L5A0AVI2 2057 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 CDC14CA4D256 554 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 P2RX6O15547 441 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 PRPF4O43172 522 aaKnown RBP eCLIP16.63■□□□□ 0.252e-7■■■■□ 25.6
SMARCAL1-209ENST00000444508 LCMT2O60294 686 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 H2AFYO75367 372 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 STATHP02808 62 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 SLC35G6P0C7Q6 338 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 CXCR2P25025 360 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 HSD17B3P37058 310 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 REEP5Q00765 189 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 EMBQ6PCB8 327 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 TIFABQ6ZNK6 161 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 LRRC70Q7Z2Q7 622 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 VN1R4Q7Z5H5 301 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 PLD6Q8N2A8 252 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 UBTD2Q8WUN7 234 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 SLC13A3Q8WWT9 602 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 COL26A1Q96A83 441 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 ESAMQ96AP7 390 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 FKBP10Q96AY3 582 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 MVB12AQ96EY5 273 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 UBL7Q96S82 380 aaPredicted RBP16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 SARGQ9BW04 601 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 ZNF304Q9HCX3 659 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 CPSF2Q9P2I0 782 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 OPTCQ9UBM4 332 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 TBK1Q9UHD2 729 aa16.63■□□□□ 0.25
SMARCAL1-209ENST00000444508 ERVH48-1M5A8F1 160 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 MAP2K7O14733 419 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 RFPL1O75677 317 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 ONECUT2O95948 504 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 SHBGP04278 402 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 C1GALT1C1LP0DN25 315 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 ITGAXP20702 1163 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 VARSP26640 1264 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 FOLR3P41439 243 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 OR1D4P47884 311 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 NFKB2Q00653 900 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 RBBP5Q15291 538 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 UGT8Q16880 541 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 TECRLQ5HYJ1 363 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 ATP1A1-AS1Q5TC04 95 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 ATG9BQ674R7 924 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 SLCO4C1Q6ZQN7 724 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 KRT78Q8N1N4 520 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 ZNF740Q8NDX6 193 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 AENQ8WTP8 325 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 ARHGAP9Q9BRR9 750 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 DRC3Q9H069 523 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 ZNF358Q9NW07 568 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 MAU2Q9Y6X3 613 aa16.62■□□□□ 0.25
SMARCAL1-209ENST00000444508 K7EPI3 171 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 NDUFS4O43181 175 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 MED26O95402 600 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 ALBP02768 609 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 SERPIND1P05546 499 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 MTHFD2P13995 350 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 FBLP22087 321 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 AHRP35869 848 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 SCTRP47872 440 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 AVPR1BP47901 424 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 AGTR2P50052 363 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 ALDH18A1P54886 795 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 PWP1Q13610 501 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 FAM53BQ14153 422 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 SETDB1Q15047 1291 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 PFKFB4Q16877 469 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 DEFB109BQ30KR1 87 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 XKR6Q5GH73 641 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 MRPL14Q6P1L8 145 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 BORAQ6PGQ7 559 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 OVCH1Q7RTY7 1134 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 TM4SF19Q96DZ7 209 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 MMABQ96EY8 250 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 MACROD1Q9BQ69 325 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 MRPL57Q9BQC6 102 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 SPNS1Q9H2V7 528 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 EHD1Q9H4M9 534 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 SLC22A11Q9NSA0 550 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 GEMIN8Q9NWZ8 242 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 XPR1Q9UBH6 696 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 ZFP69BQ9UJL9 534 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 NXT1Q9UKK6 140 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 TMCO1Q9UM00 188 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 POLHQ9Y253 713 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms