RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 HMBSP08397 361 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 FGF2P09038 288 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 CCDC159P0C7I6 412 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 ACP2P11117 423 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 NAGAP17050 411 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 S1PR1P21453 382 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 FBLP22087 321 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 JAK1P23458 1154 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 FCARP24071 287 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 FCGR2BP31994 310 aaPredicted RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 DUTP33316 252 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 OR1D2P34982 312 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 RPL3P39023 403 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 RFX5P48382 616 aaPredicted RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 MXI1P50539 228 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 PEX5P50542 639 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 ZXDBP98169 803 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 MBTD1Q05BQ5 628 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 TRAF1Q13077 416 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 MXD4Q14582 209 aaPredicted RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 USH1GQ495M9 461 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 FILIP1LQ4L180 1135 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 ARHGEF16Q5VV41 709 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 FCRLBQ6BAA4 426 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 FIP1L1Q6UN15 594 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 Q6ZPA2 131 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 GLCCI1Q86VQ1 547 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 GBGT1Q8N5D6 347 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 STKLD1Q8NE28 680 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 IRGQQ8WZA9 623 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 WASF1Q92558 559 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 PIGTQ969N2 578 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 ULK4Q96C45 1275 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 THOC1Q96FV9 657 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 THOC3Q96J01 351 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 RPGRIP1Q96KN7 1286 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 TCEANC2Q96MN5 208 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 TOX2Q96NM4 488 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 CDK5RAP1Q96SZ6 601 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 MAP3K3Q99759 626 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 THAP2Q9H0W7 228 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 TOR3AQ9H497 397 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 C5orf66Q9H5L9 145 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 DCLRE1BQ9H816 532 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 PDGFCQ9NRA1 345 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 YAE1D1Q9NRH1 226 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 ACOXLQ9NUZ1 547 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 CNOT11Q9UKZ1 510 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 MRPS2Q9Y399 296 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 TMED7Q9Y3B3 224 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 TRAV18A0A075B6X5 111 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ANTXRLA6NF34 631 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 C15orf62A8K5M9 175 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 FAM25EA8MYX2 175 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 K7EQM0 130 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 SLC22A2O15244 555 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 RFPL2O75678 378 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 C1QL1O75973 258 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 MFN2O95140 757 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 PIGNO95427 931 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 RAF1P04049 648 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 RALAP11233 206 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 B4GALT1P15291 398 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 CSF2RAP15509 400 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ARSBP15848 533 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 GOT1P17174 413 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 PAX7P23759 505 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 HTR2AP28223 471 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 TMOD1P28289 359 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 HLA-FP30511 346 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 SRD5A2P31213 254 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 MNDAP41218 407 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 CLCN4P51793 760 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 BRWD1-AS2P59051 145 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 RPP38P78345 283 aaKnown RBP4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 CX3CL1P78423 397 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 TNFRSF17Q02223 184 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 GHRHRQ02643 423 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 PDK4Q16654 411 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 AKNAD1Q5T1N1 836 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 NKAIN2Q5VXU1 208 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF66Q6ZN08 573 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 CDHR3Q6ZTQ4 885 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 PAQR9Q6ZVX9 377 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 RUFY3Q7L099 469 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 PTOV1Q86YD1 416 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF548Q8NEK5 533 aaPredicted RBP4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF671Q8TAW3 534 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 CHPT1Q8WUD6 406 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 FCGR1BQ92637 280 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF75CPQ92670 426 aaPredicted RBP4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 DVL3Q92997 716 aaPredicted RBP4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 NCLNQ969V3 563 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF607Q96SK3 696 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 TRMT61BQ9BVS5 477 aaKnown RBP4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ZCCHC4Q9H5U6 513 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 FAM207AQ9NSI2 230 aaPredicted RBP4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 DDX18Q9NVP1 670 aaKnown RBP4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 IL36RNQ9UBH0 155 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms