RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 DCAF5Q96JK2 942 aa5.45□□□□□ -1.54
PTPRC-209ENST00000442510 FEM1CQ96JP0 617 aa5.45□□□□□ -1.54
PTPRC-209ENST00000442510 NAA50Q9GZZ1 169 aaKnown RBP5.45□□□□□ -1.54
PTPRC-209ENST00000442510 MOB1AQ9H8S9 216 aa5.45□□□□□ -1.54
PTPRC-209ENST00000442510 SSU72Q9NP77 194 aaKnown RBP5.45□□□□□ -1.54
PTPRC-209ENST00000442510 LRFN1Q9P244 771 aa5.45□□□□□ -1.54
PTPRC-209ENST00000442510 TMEM181Q9P2C4 612 aa5.45□□□□□ -1.54
PTPRC-209ENST00000442510 ZNF69Q9UC07 566 aa5.45□□□□□ -1.54
PTPRC-209ENST00000442510 ZMYM5Q9UJ78 669 aa5.45□□□□□ -1.54
PTPRC-209ENST00000442510 NME7Q9Y5B8 376 aa5.45□□□□□ -1.54
PTPRC-209ENST00000442510 SIGLEC16A6NMB1 481 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 UBXN7O94888 489 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CLIC3O95833 236 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CYB5R3P00387 301 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 SRPRAP08240 638 aaKnown RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CYP4B1P13584 511 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CPEP16870 476 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 HOXC12P31275 282 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 SPRP35270 261 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 MC3RP41968 323 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 GLP1RP43220 463 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 S100A10P60903 97 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 RRAS2P62070 204 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 RPL23AP62750 156 aaKnown RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 KLRC3Q07444 240 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ENPP2Q13822 863 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 EXOSC2Q13868 293 aaKnown RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 GRB7Q14451 532 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 N4BP2L1Q5TBK1 243 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 PLA2G4FQ68DD2 849 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 VASNQ6EMK4 673 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 KIAA0930Q6ICG6 404 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 PRR27Q6MZM9 219 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 SLC27A4Q6P1M0 643 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 BLOC1S3Q6QNY0 202 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 SLC22A25Q6T423 547 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 TEX261Q6UWH6 196 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 GTPBP8Q8N3Z3 284 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ZCCHC9Q8N567 271 aaKnown RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 BEND7Q8N7W2 519 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 OR6F1Q8NGZ6 308 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ATOH1Q92858 354 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 HLA-CQ95604 372 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 SLC35C1Q96A29 364 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ASB9Q96DX5 294 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 RHOVQ96L33 236 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ZNF512Q96ME7 567 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 P2RX7Q99572 595 aaKnown RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 IL12RB2Q99665 862 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 SEPT5Q99719 369 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 MTFR1LQ9H019 292 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 KCMF1Q9P0J7 381 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 EGFL7Q9UHF1 273 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 DHRS7Q9Y394 339 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 U3KQ87 197 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 IQCMA0A1B0GVH7 501 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 F5H0A9 414 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 RBAK-RBAKDNI3L0D1 243 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 FFAR3O14843 346 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 GPR42O15529 346 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 TSPAN3O60637 253 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 MAFKO60675 156 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ZNF821O75541 412 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CBX7O95931 251 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 PRH1P02810 166 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 SNRNP70P08621 437 aaKnown RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 UBCP0CG48 685 aaKnown RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CPN2P22792 545 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CTSSP25774 331 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ELK4P28324 431 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 PITPNBP48739 271 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 PPT1P50897 306 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 SLC18A1P54219 525 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ACTBP60709 375 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 PPP3R1P63098 170 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ACTG1P63261 375 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 DLGAP5Q15398 846 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 TMEM95Q3KNT9 176 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 PIGGQ5H8A4 983 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 TMEM65Q6PI78 240 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 PTCHD4Q6ZW05 846 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 G2E3Q7L622 706 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 LRRTM4Q86VH4 590 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 TXNRD3Q86VQ6 643 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 EXD3Q8N9H8 876 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CAMKVQ8NCB2 501 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 NUDT10Q8NFP7 164 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 METTL21AQ8WXB1 218 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 DYRK2Q92630 601 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 TNFRSF14Q92956 283 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 TOE1Q96GM8 510 aaKnown RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 LENG8Q96PV6 779 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 CPXM1Q96SM3 734 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 NELL2Q99435 816 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 TXN2Q99757 166 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 MED10Q9BTT4 135 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 MSTO1Q9BUK6 570 aa5.44□□□□□ -1.54
PTPRC-209ENST00000442510 RIMS4Q9H426 269 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-209ENST00000442510 ZNF385DQ9H6B1 395 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms