RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SIM1P81133 766 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 MBTD1Q05BQ5 628 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZNF33AQ06730 810 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TCF15Q12870 199 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FRG1Q14331 258 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 PUM1Q14671 1186 aaKnown RBP eCLIP2.7□□□□□ -1.98
LIG4-203ENST00000442234 RPS6KA2Q15349 733 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CYP1B1Q16678 543 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 QRICH1Q2TAL8 776 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 WSCD2Q2TBF2 565 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ADPRMQ3LIE5 342 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PARP15Q460N3 678 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RNF212Q495C1 297 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SLC36A3Q495N2 470 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TIGD5Q53EQ6 642 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PIGGQ5H8A4 983 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 OR2B11Q5JQS5 317 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TOR1AIP1Q5JTV8 583 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ADGRF1Q5T601 910 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ANKRD22Q5VYY1 191 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZNF57Q68EA5 555 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 CFAP161Q6P656 301 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TEX261Q6UWH6 196 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FAM131AQ6UXB0 335 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TRMT11Q7Z4G4 463 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 ANKS1BQ7Z6G8 1248 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GRASPQ7Z6J2 395 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 GPAT4Q86UL3 456 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZDHHC13Q8IUH4 622 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TBC1D10CQ8IV04 446 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RBFAQ8N0V3 343 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 OXR1Q8N573 874 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ATPAF2Q8N5M1 289 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 COQ8AQ8NI60 647 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 LNX1Q8TBB1 728 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 SLC20A1Q8WUM9 679 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NSMAFQ92636 917 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GTF3AQ92664 365 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 APBB2Q92870 758 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 WNT8BQ93098 351 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SLC22A18Q96BI1 424 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 C11orf24Q96F05 449 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 BSCL2Q96G97 398 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 CELF6Q96J87 481 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 SERAC1Q96JX3 654 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CCDC17Q96LX7 622 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CCDC74BQ96LY2 380 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CSPG4P5Q96PW8 444 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SLC2A13Q96QE2 648 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 C7orf25Q9BPX7 421 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FRMD8P1Q9BZ68 369 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 GSX2Q9BZM3 304 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GPR88Q9GZN0 384 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GANQ9H2C0 597 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 REEP4Q9H6H4 257 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ELAC1Q9H777 363 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 RNF121Q9H920 327 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SPAG4Q9NPE6 437 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RASSF1Q9NS23 344 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SEMA3GQ9NS98 782 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DUS2Q9NX74 493 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 GFOD1Q9NXC2 390 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SMPD4Q9NXE4 827 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GTSE1Q9NYZ3 720 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TMEM181Q9P2C4 612 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 EGFL7Q9UHF1 273 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 KLHL21Q9UJP4 597 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZNF112Q9UJU3 913 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DUSP12Q9UNI6 340 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PCDHGB2Q9Y5G2 931 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CLCA3PQ9Y6N3 262 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 U3KQ87 197 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 WDFY3Q8IZQ1 3526 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PKDREJQ9NTG1 2253 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ABCA7Q8IZY2 2146 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TMEM238LA0A1B0GVL6 79 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PQLC2LA1A4F0 135 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MROH6A6NGR9 719 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ANKDD1BA6NHY2 528 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 NCF1BA6NI72 391 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 NCF1CA8MVU1 366 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 H7C1Q1 480 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MYL12BO14950 172 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SLC22A2O15244 555 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SLC31A2O15432 143 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RRP8O43159 456 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 TRIM3O75382 744 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 GABARAPO95166 117 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ANGPTL1O95841 491 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 BPNT1O95861 308 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ADRB1P08588 477 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TSPAN19P0C672 248 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SMIM10L2AP0DMW4 78 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SMIM10L2BP0DMW5 78 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RRASP10301 218 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 THRBP10828 461 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ANXA8P13928 327 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF8P17098 575 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 JUNBP17275 347 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 MYL12AP19105 171 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms