RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 LUZP4Q9P127 313 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 CTSFQ9UBX1 484 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 RUVBL1Q9Y265 456 aaKnown RBP7.38□□□□□ -1.23
CD44-211ENST00000442151 TCRBV7S3A2A0A539 114 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 WIPF3A6NGB9 483 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 ALOX12BO75342 701 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 AVILO75366 819 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 H2AFYO75367 372 aaKnown RBP7.38□□□□□ -1.23
CD44-211ENST00000442151 SLC35G6P0C7Q6 338 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 C8orf89P0DMQ9 161 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 JAK1P23458 1154 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 PSMB5P28074 263 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 PAFAH1B1P43034 410 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 UQCRFS1P47985 274 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 TERF1P54274 439 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 RGS1Q08116 209 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 CTBP1Q13363 440 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 NAA30Q147X3 362 aaPredicted RBP7.38□□□□□ -1.23
CD44-211ENST00000442151 HERC3Q15034 1050 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 HIF1AQ16665 826 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 CCSMST1Q4G0I0 132 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.38□□□□□ -1.23
CD44-211ENST00000442151 FAM45BPQ6NSW5 357 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 LCTLQ6UWM7 567 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 CYHR1Q6ZMK1 362 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 LINC00696Q6ZRV3 163 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 SHISA6Q6ZSJ9 500 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 METTL27Q8N6F8 245 aaPredicted RBP7.38□□□□□ -1.23
CD44-211ENST00000442151 FAM98AQ8NCA5 519 aaKnown RBP7.38□□□□□ -1.23
CD44-211ENST00000442151 C2CD4AQ8NCU7 369 aaPredicted RBP7.38□□□□□ -1.23
CD44-211ENST00000442151 BBOF1Q8ND07 529 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 FAM45AQ8TCE6 357 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 ZNF480Q8WV37 535 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 ANKRD7Q92527 254 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 SIGLEC10Q96LC7 697 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 GPR21Q99679 349 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 CAPS2Q9BXY5 557 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 IARS2Q9NSE4 1012 aaKnown RBP7.38□□□□□ -1.23
CD44-211ENST00000442151 OLAHQ9NV23 265 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 STMN3Q9NZ72 180 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 ASIC3Q9UHC3 531 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 MKL2Q9ULH7 1088 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 PCDHGB6Q9Y5F9 930 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 SLC22A7Q9Y694 548 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 PCM1Q15154 2024 aa7.38□□□□□ -1.23
CD44-211ENST00000442151 TNRC6AQ8NDV7 1962 aaKnown RBP7.37□□□□□ -1.23
CD44-211ENST00000442151 SPTBP11277 2137 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 ANKRD12Q6UB98 2062 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 IGHV1-45A0A0A0MS14 117 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 ZCWPW2A0A1B0GU75 182 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 GOLGA8MH3BSY2 632 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 H7BY64 318 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 DNALI1O14645 258 aaPredicted RBP7.37□□□□□ -1.23
CD44-211ENST00000442151 HAUS5O94927 633 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 RASAL1O95294 804 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 CTSBP07858 339 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 PRR35P0CG20 571 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 CCR8P51685 355 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 MRPL49Q13405 166 aaKnown RBP7.37□□□□□ -1.23
CD44-211ENST00000442151 PWP1Q13610 501 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 HSP90AA5PQ58FG0 334 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 VWA2Q5GFL6 755 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 MFSD4BQ5TF39 518 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 AGTRAPQ6RW13 159 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 TMEM205Q6UW68 189 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 CPEB2Q7Z5Q1 589 aaKnown RBP7.37□□□□□ -1.23
CD44-211ENST00000442151 ASPGQ86U10 573 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 PRSS58Q8IYP2 241 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 EID3Q8N140 333 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 ARMC2Q8NEN0 867 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 M1APQ8TC57 530 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 GRHL3Q8TE85 626 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 FAM136AQ96C01 138 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 C19orf60Q96EN9 201 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 VPS39Q96JC1 886 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 C10orf90Q96M02 699 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 PRAP1Q96NZ9 151 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 OR1F2PQ96R84 312 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 OSBPL9Q96SU4 736 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 PPANQ9NQ55 473 aaKnown RBP7.37□□□□□ -1.23
CD44-211ENST00000442151 ABCF3Q9NUQ8 709 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 PTGFRNQ9P2B2 879 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 RNF14Q9UBS8 474 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 DYRK1BQ9Y463 629 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 BOD1L1Q8NFC6 3051 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 BSNQ9UPA5 3926 aa7.37□□□□□ -1.23
CD44-211ENST00000442151 ESPL1Q14674 2120 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 DOPEY2Q9Y3R5 2298 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 A0A0A6YYC8 382 aaPredicted RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 I3L1I5 382 aaPredicted RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 TTI1O43156 1089 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 SEMA7AO75326 666 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 JRKO75564 520 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 COX6A1P12074 109 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 GSTM2P28161 218 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 BCL6P41182 706 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 SLC1A2P43004 574 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 MAGEA3P43357 314 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CCZ1BP86790 482 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CCZ1P86791 482 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms