RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SLC36A4Q6YBV0 504 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 Q6ZSR6 202 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 NUDT13Q86X67 352 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 LRRC56Q8IYG6 542 aaPredicted RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 TRPV3Q8NET8 790 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 OR2T12Q8NG77 320 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 NCLNQ969V3 563 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 TOE1Q96GM8 510 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 ZNF184Q99676 751 aaPredicted RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 IER2Q9BTL4 223 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 EBPLQ9BY08 206 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 BHLHE41Q9C0J9 482 aaPredicted RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 ROGDIQ9GZN7 287 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 RHBGQ9H310 441 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 REEP4Q9H6H4 257 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 LTB4R2Q9NPC1 389 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 MIEF1Q9NQG6 463 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 TM7SF3Q9NS93 570 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ANKMY1Q9P2S6 941 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ZNF282Q9UDV7 671 aaPredicted RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 BTNL2Q9UIR0 455 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 ADAM29Q9UKF5 820 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 LRCH1Q9Y2L9 728 aa5.8□□□□□ -1.48
VPS50-205ENST00000441602 CFAP20Q9Y6A4 193 aaKnown RBP5.8□□□□□ -1.48
VPS50-205ENST00000441602 HTTP42858 3142 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 KIR2DS5A0A0G2JLQ3 304 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 A0A0G2JNG1 304 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PRSS51A0A1B0GVH4 220 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 TCRBV3S1A0A5B6 114 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ELOVL7A1L3X0 281 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 FAM220BPB1ANY3 271 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 KIR2DS3K7RE56 304 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 CASQ2O14958 399 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 ARPC2O15144 300 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 OR1F1O43749 312 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PRAMEF4O60810 478 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 LRATO95237 230 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 CPSF4O95639 269 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 CHRNB1P11230 501 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 CD22P20273 847 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ATP6V1C1P21283 382 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 FASP25445 335 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 GRIA3P42263 894 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 DPP6P42658 865 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 POLE2P56282 527 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 TRA2BP62995 288 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 CHRNB3Q05901 458 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PRDX1Q06830 199 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 RGS1Q08116 209 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 C2orf80Q0P641 193 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 KIR2DS3Q14952 304 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 KIR2DS5Q14953 304 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ZXDCQ2QGD7 858 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 FAM98BQ52LJ0 330 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 RUNDC3AQ59EK9 446 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 CCNYL2Q5T2Q4 361 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PRAMEF9Q5VWM5 478 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ABI3BPQ7Z7G0 1075 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 OOSP2Q86WS3 158 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PTRH1Q86Y79 214 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 MICU2Q8IYU8 434 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 OR52E1Q8NGJ3 308 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 GTF2H4Q92759 462 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 FAM162AQ96A26 154 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 THAP11Q96EK4 314 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 NAF1Q96HR8 494 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 TEX37Q96LM6 180 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PANX1Q96RD7 426 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 GPR174Q9BXC1 333 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 SRMSQ9H3Y6 488 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ACTL8Q9H568 366 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 SLC52A3Q9NQ40 469 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 SH3BP4Q9P0V3 963 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ATP6V1HQ9UI12 483 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PCOLCE2Q9UKZ9 415 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 LRRC42Q9Y546 428 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ENTPD2Q9Y5L3 495 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 DGKBQ9Y6T7 804 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ANKRD12Q6UB98 2062 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 POM121BA6NF01 834 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 URADA6NGE7 173 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 CAPN5O15484 640 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 NDUFS4O43181 175 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ZW10O43264 779 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 KRT75O95678 551 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 TGFB1P01137 390 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 SERPIND1P05546 499 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 F3P13726 295 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ZNF10P21506 573 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 ERFP50548 548 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ARFIP1P53367 373 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ATXN3P54252 364 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 STXBP1P61764 594 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 MS4A2Q01362 244 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 MTAPQ13126 283 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 SF1Q15637 639 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 CYP51A1Q16850 503 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 LRIF1Q5T3J3 769 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 DEPDC1Q5TB30 811 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms