RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 GPR156Q8NFN8 814 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 TTLQ8NG68 377 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 OR2L8Q8NGY9 312 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 SH3KBP1Q96B97 665 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 PANX1Q96RD7 426 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 FERD3LQ96RJ6 166 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 C9orf16Q9BUW7 83 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 DUSP26Q9BV47 211 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 BHLHE41Q9C0J9 482 aaPredicted RBP12.67□□□□□ -0.38
CPSF4-206ENST00000441580 RHBGQ9H310 441 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 RPF2Q9H7B2 306 aaKnown RBP12.67□□□□□ -0.38
CPSF4-206ENST00000441580 KAT8Q9H7Z6 458 aaKnown RBP12.67□□□□□ -0.38
CPSF4-206ENST00000441580 IMP3Q9NV31 184 aaKnown RBP12.67□□□□□ -0.38
CPSF4-206ENST00000441580 ATP6V1HQ9UI12 483 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 SCOCQ9UIL1 159 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 KCNK6Q9Y257 313 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 WBP11Q9Y2W2 641 aaKnown RBP12.67□□□□□ -0.38
CPSF4-206ENST00000441580 GMEB1Q9Y692 573 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 TRANK1O15050 2925 aa12.67□□□□□ -0.38
CPSF4-206ENST00000441580 PCM1Q15154 2024 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 H3BQ06 376 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 RNASET2O00584 256 aaKnown RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 TNFRSF10CO14798 259 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 MBTPS2O43462 519 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 TIPRLO75663 272 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 APBB3O95704 486 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 ZCCHC18P0CG32 403 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 NCK1P16333 377 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 IGFBP4P22692 258 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 PTX3P26022 381 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 PTPN6P29350 595 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 OXTRP30559 389 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 MAT2AP31153 395 aaKnown RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 YBX1P67809 324 aaKnown RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 ABATP80404 500 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 PDE7AQ13946 482 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 KRT33BQ14525 404 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 ATP6AP1Q15904 470 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 HKDC1Q2TB90 917 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 LRIT3Q3SXY7 679 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 GTDC1Q4AE62 458 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 TMTC4Q5T4D3 741 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 ADNP2Q6IQ32 1131 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 WASH2PQ6VEQ5 465 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 PAGE2Q7Z2X7 111 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 SERPINA11Q86U17 422 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 TBC1D19Q8N5T2 526 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 OR10A6Q8NH74 314 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 FAM3CQ92520 227 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 NCLNQ969V3 563 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 FAM162AQ96A26 154 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 CENPNQ96H22 339 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 ZNF583Q96ND8 569 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 QRFPRQ96P65 431 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 INSM2Q96T92 566 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 GAS2L1Q99501 681 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 PHF7Q9BWX1 381 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 UGT2B28Q9BY64 529 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 PRO3102Q9H379 93 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 REEP4Q9H6H4 257 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 MAGIXQ9H6Y5 334 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 KIR3DX1Q9H7L2 352 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 CARS2Q9HA77 564 aaKnown RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 FGF22Q9HCT0 170 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 POLMQ9NP87 494 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 FZD3Q9NPG1 666 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 SLC2A4RGQ9NR83 387 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 ZNF282Q9UDV7 671 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 MOSPD1Q9UJG1 213 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 GPSM3Q9Y4H4 160 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 PCDHB14Q9Y5E9 798 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 PCDHB11Q9Y5F2 797 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 CFAP20Q9Y6A4 193 aaKnown RBP12.66□□□□□ -0.38
CPSF4-206ENST00000441580 AP1M2Q9Y6Q5 423 aa12.66□□□□□ -0.38
CPSF4-206ENST00000441580 NUMA1Q14980 2115 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 ANKDD1BA6NHY2 528 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 CXCR6O00574 342 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 MAN2B1O00754 1011 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 TXNDC9O14530 226 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 SLC31A1O15431 190 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 DENRO43583 198 aaKnown RBP12.65□□□□□ -0.38
CPSF4-206ENST00000441580 LDLRP01130 860 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 IGLV3-19P01714 112 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 RAP2AP10114 183 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 SRFP11831 508 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 IL1RNP18510 177 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 RPL10P27635 214 aaKnown RBP12.65□□□□□ -0.38
CPSF4-206ENST00000441580 SHMT2P34897 504 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 NUDT1P36639 197 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 TPMTP51580 245 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 WNT3P56703 355 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 YPEL5P62699 121 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 PHC1P78364 1004 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 PLIN5Q00G26 463 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 HMBOX1Q6NT76 420 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 FAM124AQ86V42 546 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 ANKRD46Q86W74 232 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 PHACTR4Q8IZ21 702 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms