RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 HIBCHQ6NVY1 386 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-219ENST00000440240 CCDC137Q6PK04 289 aaKnown RBP19.63■□□□□ 0.73
CPNE1-219ENST00000440240 PIWIL4Q7Z3Z4 852 aaKnown RBP19.63■□□□□ 0.73
CPNE1-219ENST00000440240 FJX1Q86VR8 437 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 TICAM1Q8IUC6 712 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 CPNE9Q8IYJ1 553 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 CAMKVQ8NCB2 501 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 OR51Q1Q8NH59 317 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 GABPB2Q8TAK5 448 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-219ENST00000440240 SIGLEC10Q96LC7 697 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 FAM167BQ9BTA0 163 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 AARSD1Q9BTE6 412 aaKnown RBP19.63■□□□□ 0.73
CPNE1-219ENST00000440240 VN1R1Q9GZP7 353 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 TRMT6Q9UJA5 497 aaKnown RBP19.63■□□□□ 0.73
CPNE1-219ENST00000440240 JRKLQ9Y4A0 524 aa19.63■□□□□ 0.73
CPNE1-219ENST00000440240 OR5H15A6NDH6 313 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 NRDCO43847 1150 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 C8GP07360 202 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 F7P08709 466 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-219ENST00000440240 CCND1P24385 295 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 BCL6P41182 706 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 CYP1B1Q16678 543 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 MINDY4Q4G0A6 757 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 MFSD4BQ5TF39 518 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 GFRALQ6UXV0 394 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 VN1R4Q7Z5H5 301 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 CPEB2Q7Z5Q1 589 aaKnown RBP19.62■□□□□ 0.73
CPNE1-219ENST00000440240 NAT8LQ8N9F0 302 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.62■□□□□ 0.73
CPNE1-219ENST00000440240 ABI3Q9P2A4 366 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 ENTPD4Q9Y227 616 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 PPP2R2CQ9Y2T4 447 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 NEU2Q9Y3R4 380 aa19.62■□□□□ 0.73
CPNE1-219ENST00000440240 ABCA12Q86UK0 2595 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 HNRNPRO43390 633 aaKnown RBP19.61■□□□□ 0.73
CPNE1-219ENST00000440240 PRAMEF2O60811 474 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 F10P00742 488 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 GRK3P35626 688 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 AGTR2P50052 363 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 TBPL1P62380 186 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 CSNK1G2P78368 415 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 ZNF33BQ06732 778 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.61■□□□□ 0.73
CPNE1-219ENST00000440240 C1QL3Q5VWW1 255 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 SP5Q6BEB4 398 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-219ENST00000440240 PLAG1Q6DJT9 500 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 TMEM214Q6NUQ4 689 aaKnown RBP19.61■□□□□ 0.73
CPNE1-219ENST00000440240 TMEM207Q6UWW9 146 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 PCGF5Q86SE9 256 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 C17orf64Q86WR6 236 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 PPIL6Q8IXY8 311 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 EEF1AKMT1Q8WVE0 214 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 TM4SF19Q96DZ7 209 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 MS4A14Q96JA4 679 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 ZNF354BQ96LW1 612 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 PARVBQ9HBI1 364 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 ANKHQ9HCJ1 492 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 TAS2R13Q9NYV9 303 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 PDE10AQ9Y233 779 aa19.61■□□□□ 0.73
CPNE1-219ENST00000440240 A8MUI8 341 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 SLC16A5O15375 505 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 SEC24DO94855 1032 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-219ENST00000440240 STATHP02808 62 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 HIST1H2AGP0C0S8 130 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-219ENST00000440240 HIST1H2ADP20671 130 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 XCR1P46094 333 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 EFNA3P52797 238 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 KCNK10P57789 538 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 MPP1Q00013 466 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 SP140Q13342 867 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 BTBD16Q32M84 506 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 AGTRAPQ6RW13 159 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 SPNS2Q8IVW8 549 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 AGGF1Q8N302 714 aaeCLIP19.6■□□□□ 0.73
CPNE1-219ENST00000440240 GRK7Q8WTQ7 553 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 SLC13A3Q8WWT9 602 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 HIST1H2AHQ96KK5 128 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 HIST1H2AJQ99878 128 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 H2AFJQ9BTM1 129 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 IARS2Q9NSE4 1012 aaKnown RBP19.6■□□□□ 0.73
CPNE1-219ENST00000440240 COPG2Q9UBF2 871 aa19.6■□□□□ 0.73
CPNE1-219ENST00000440240 UNC5CO95185 931 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 IL1RNP18510 177 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 PGAM1P18669 254 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 IL10P22301 178 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 SNRPNP63162 240 aaKnown RBP19.59■□□□□ 0.73
CPNE1-219ENST00000440240 CCZ1BP86790 482 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 CCZ1P86791 482 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-219ENST00000440240 NAE1Q13564 534 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 CAPN13Q6MZZ7 669 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-219ENST00000440240 H3F3CQ6NXT2 135 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 MYO7BQ6PIF6 2116 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 PRSS41Q7RTY9 318 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 ASPGQ86U10 573 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 MYO1HQ8N1T3 1032 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 C2CD4AQ8NCU7 369 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-219ENST00000440240 MACROD1Q9BQ69 325 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 ATG10Q9H0Y0 220 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 RUBCNLQ9H714 662 aa19.59■□□□□ 0.73
CPNE1-219ENST00000440240 HCN3Q9P1Z3 774 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms