RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 NDC1Q9BTX1 674 aa16.9■□□□□ 0.3
CCDC188-201ENST00000439765 PCBD2Q9H0N5 130 aa16.9■□□□□ 0.3
CCDC188-201ENST00000439765 TXLNGQ9NUQ3 528 aa16.9■□□□□ 0.3
CCDC188-201ENST00000439765 GEMIN8Q9NWZ8 242 aaKnown RBP16.9■□□□□ 0.3
CCDC188-201ENST00000439765 GRID1Q9ULK0 1009 aa16.9■□□□□ 0.3
CCDC188-201ENST00000439765 SRPK3Q9UPE1 567 aa16.9■□□□□ 0.3
CCDC188-201ENST00000439765 TERTO14746 1132 aaKnown RBP16.89■□□□□ 0.29
CCDC188-201ENST00000439765 PRPF4O43172 522 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCDC188-201ENST00000439765 ANXA5P08758 320 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 HBQ1P09105 142 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 CDH1P12830 882 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 EZRP15311 586 aaKnown RBP16.89■□□□□ 0.29
CCDC188-201ENST00000439765 RPS18P62269 152 aaKnown RBP16.89■□□□□ 0.29
CCDC188-201ENST00000439765 SLC9A5Q14940 896 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 ACAP2Q15057 778 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 C18orf21Q32NC0 220 aaPredicted RBP16.89■□□□□ 0.29
CCDC188-201ENST00000439765 CRTC2Q53ET0 693 aaPredicted RBP16.89■□□□□ 0.29
CCDC188-201ENST00000439765 RHBDD2Q6NTF9 364 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 FAM198BQ6UWH4 519 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 LCTLQ6UWM7 567 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 ISCA2Q86U28 154 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 OR4K3Q96R72 315 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 ACTL8Q9H568 366 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 ALG9Q9H6U8 611 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 KCNK9Q9NPC2 374 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 TMEM216Q9P0N5 145 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 SNX7Q9UNH6 387 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 MED13Q9UHV7 2174 aa16.89■□□□□ 0.29
CCDC188-201ENST00000439765 H0YGG7 62 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 SLC28A2O43868 658 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 STATHP02808 62 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 TFEBP19484 476 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 GLRBP48167 497 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 ARF3P61204 181 aaPredicted RBP16.88■□□□□ 0.29
CCDC188-201ENST00000439765 CDKL1Q00532 357 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 GRM7Q14831 915 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 FBXO48Q5FWF7 155 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 TCTE1Q5JU00 501 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 WASHC2DQ5SRD0 308 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 ATP1A1-AS1Q5TC04 95 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 ZNF385CQ66K41 422 aaPredicted RBP16.88■□□□□ 0.29
CCDC188-201ENST00000439765 C16orf46Q6P387 395 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 FBXO42Q6P3S6 717 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 KLC3Q6P597 504 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 ZNF517Q6ZMY9 492 aaPredicted RBP16.88■□□□□ 0.29
CCDC188-201ENST00000439765 TTLL10Q6ZVT0 673 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 GPSM1Q86YR5 675 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 DTWD1Q8N5C7 304 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 TTC29Q8NA56 475 aaPredicted RBP16.88■□□□□ 0.29
CCDC188-201ENST00000439765 TCP10LQ8TDR4 215 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 ZNF285Q96NJ3 590 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 HAUS8Q9BT25 410 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 FAM117AQ9C073 453 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 IQCGQ9H095 443 aaKnown RBP16.88■□□□□ 0.29
CCDC188-201ENST00000439765 NDOR1Q9UHB4 597 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 KCND3Q9UK17 655 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 RNF112Q9ULX5 631 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 PLLPQ9Y342 182 aa16.88■□□□□ 0.29
CCDC188-201ENST00000439765 C21orf140B9A014 251 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 NKX2-8O15522 239 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 SRPX2O60687 465 aaPredicted RBP16.87■□□□□ 0.29
CCDC188-201ENST00000439765 NPPBP16860 134 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 ALAS2P22557 587 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 HPDP32754 393 aaPredicted RBP16.87■□□□□ 0.29
CCDC188-201ENST00000439765 NFKB2Q00653 900 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 CDC20Q12834 499 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 MPP2Q14168 576 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 FAM69BQ5VUD6 431 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 METTL27Q8N6F8 245 aaPredicted RBP16.87■□□□□ 0.29
CCDC188-201ENST00000439765 CSNK1A1LQ8N752 337 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 RERGQ96A58 199 aaPredicted RBP16.87■□□□□ 0.29
CCDC188-201ENST00000439765 KIAA1191Q96A73 305 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 RHBDF1Q96CC6 855 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 GBP5Q96PP8 586 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 SLC25A18Q9H1K4 315 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 CUTCQ9NTM9 273 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 WWOXQ9NZC7 414 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 TUBD1Q9UJT1 453 aa16.87■□□□□ 0.29
CCDC188-201ENST00000439765 HEMK1Q9Y5R4 338 aaPredicted RBP16.87■□□□□ 0.29
CCDC188-201ENST00000439765 A0A1B0GX78 115 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 FEZF1A0PJY2 475 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 CCDC189A1A4V9 331 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 C9J4A7 227 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 P2RX6O15547 441 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 WDR47O94967 919 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 RBP1P09455 135 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 AGXTP21549 392 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 GDF5P43026 501 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 GCGRP47871 477 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 HNMTP50135 292 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 SLC18A1P54219 525 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 POLE2P56282 527 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 PPP2R2AP63151 447 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 CSNK1G2P78368 415 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 MC1RQ01726 317 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 MEF2AQ02078 507 aaPredicted RBP16.86■□□□□ 0.29
CCDC188-201ENST00000439765 HKDC1Q2TB90 917 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 TECRLQ5HYJ1 363 aa16.86■□□□□ 0.29
CCDC188-201ENST00000439765 THOC6Q86W42 341 aaKnown RBP16.86■□□□□ 0.29
CCDC188-201ENST00000439765 TMEM151AQ8N4L1 468 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms