RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 TBC1D3HP0C7X1 549 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 LAMP1P11279 417 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 HOXB6P17509 224 aaKnown RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 CKMT2P17540 419 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 POU3F3P20264 500 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 IDSP22304 550 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 CXCR2P25025 360 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 SERPINB1P30740 379 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 SOX11P35716 441 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 RPL3P39023 403 aaKnown RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 CHN2P52757 468 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 PPP2CBP62714 309 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 PPP2CAP67775 309 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 REEP5Q00765 189 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 MEF2AQ02078 507 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 SF1Q15637 639 aaKnown RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 HKDC1Q2TB90 917 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 FAM98BQ52LJ0 330 aaKnown RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TMTC4Q5T4D3 741 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 CPTPQ5TA50 214 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 ANXA8L1Q5VT79 327 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3GQ6DHY5 549 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3CQ6IPX1 549 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 DUS1LQ6P1R4 473 aaKnown RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 ARMCX6Q7L4S7 300 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 COMMD6Q7Z4G1 85 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 VN1R5Q7Z5H4 357 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 SPRED1Q7Z699 444 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 EPHX4Q8IUS5 362 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 PHACTR4Q8IZ21 702 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3Q8IZP1 549 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 RAB42Q8N4Z0 105 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 MFSD2AQ8NA29 543 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 GPR156Q8NFN8 814 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 ABHD11Q8NFV4 315 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 CDC26Q8NHZ8 85 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 FIG4Q92562 907 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 MIEF2Q96C03 454 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 AURKBQ96GD4 344 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 C12orf66Q96MD2 445 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 PANX1Q96RD7 426 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 INSM2Q96T92 566 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 PRPF18Q99633 342 aaKnown RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 AIF1LQ9BQI0 150 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 RAB11FIP5Q9BXF6 653 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 UGT2B28Q9BY64 529 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 RHBGQ9H310 441 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 NT5DC2Q9H857 520 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 MYNNQ9NPC7 610 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 DLGAP2Q9P1A6 1054 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 WDR37Q9Y2I8 494 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 CFAP20Q9Y6A4 193 aaKnown RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 GNG14A0A1W2PPG7 69 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 FAM149AA5PLN7 773 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 SAC3D1A6NKF1 404 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 EVPLLA8MZ36 301 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 C2CD4DB7Z1M9 353 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 SOCS2O14508 198 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 SH3BGRLO75368 114 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 SEMA3DO95025 777 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 EPN2O95208 641 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 LDLRP01130 860 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 TGFB1P01137 390 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 ZCCHC18P0CG32 403 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 RAP2AP10114 183 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 GPX2P18283 190 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 IL1RNP18510 177 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 PTX3P26022 381 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-202ENST00000439724 RPL10P27635 214 aaKnown RBP11.31□□□□□ -0.6
SMAD3-202ENST00000439724 TXNL4AP83876 142 aaKnown RBP11.31□□□□□ -0.6
SMAD3-202ENST00000439724 CHRNB3Q05901 458 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 PDE7AQ13946 482 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-202ENST00000439724 NRF1Q16656 503 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 FBXO43Q4G163 708 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 EOGTQ5NDL2 527 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 OR52E8Q6IFG1 317 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 FKBP9P1Q75LS8 142 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 SERPINA11Q86U17 422 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 TRIM69Q86WT6 500 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 CHERPQ8IWX8 916 aaKnown RBP11.31□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF740Q8NDX6 193 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 VPS37AQ8NEZ2 397 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 OR4K1Q8NGD4 311 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 FAM162AQ96A26 154 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 MRGPRX1Q96LB2 322 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 RNF145Q96MT1 663 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 CAMK1GQ96NX5 476 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 FERD3LQ96RJ6 166 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 SEPHS2Q99611 448 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 CENPKQ9BS16 269 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 TBCDQ9BTW9 1192 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 CHID1Q9BWS9 393 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 BHLHE41Q9C0J9 482 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-202ENST00000439724 OR51B5Q9H339 312 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 OSGEPL1Q9H4B0 414 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 REEP4Q9H6H4 257 aa11.31□□□□□ -0.6
SMAD3-202ENST00000439724 MVB12BQ9H7P6 319 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms