RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR7G1Q8NGA0 311 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 OR4A15Q8NGL6 344 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 C8orf48Q96LL4 319 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 ZFYVE1Q9HBF4 777 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 TMCC3Q9ULS5 477 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 SNX7Q9UNH6 387 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 SSR3Q9UNL2 185 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 HSPB11Q9Y547 144 aa8.77□□□□□ -1.01
COPB1-202ENST00000439561 A0A1W2PQ09 198 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 C12orf71A8MTZ7 269 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 MEN1O00255 615 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PLOD3O60568 738 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 MTX2O75431 263 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 WBP4O75554 376 aaKnown RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 SDC1P18827 310 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 CXCR4P61073 352 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PPIGQ13427 754 aaKnown RBP eCLIP8.76□□□□□ -1.011e-7■□□□□ 11.1
COPB1-202ENST00000439561 DUOXA1Q1HG43 343 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 EXOC3L2Q2M3D2 409 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 ZC3H12BQ5HYM0 836 aaKnown RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 CPTPQ5TA50 214 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 SBSNQ6UWP8 590 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PAMR1Q6UXH9 720 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 CASP12Q6UXS9 341 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 GPC2Q8N158 579 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 OR4K1Q8NGD4 311 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 LKAAEAR1Q8TD35 194 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 JPH3Q8WXH2 748 aaPredicted RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 TSPAN18Q96SJ8 248 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PRDM5Q9NQX1 630 aaPredicted RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 QPCTLQ9NXS2 382 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PCDHB1Q9Y5F3 818 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 FAM240BA0A1B0GVZ2 78 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 M0R082 166 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 WWP2O00308 870 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 ADAMDEC1O15204 470 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 OR10H3O60404 316 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 TPST2O60704 377 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 CCNB2O95067 398 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 WISP3O95389 354 aaPredicted RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 IGLV3-25P01717 112 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 CDK1P06493 297 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 EBLN1P0CF75 366 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 TNNI3P19429 210 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PBLDP30039 288 aaPredicted RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 MAPKAPK2P49137 400 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 CLDN8P56748 225 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PCBP2Q15366 365 aaKnown RBP eCLIP8.76□□□□□ -1.012e-11■■■■■ 33.8
COPB1-202ENST00000439561 CCL14Q16627 93 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PTCHD3Q3KNS1 767 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 IQCCQ4KMZ1 466 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 XKR4Q5GH76 650 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 LIPKQ5VXJ0 399 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 ERICH5Q6P6B1 374 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 SLC46A3Q7Z3Q1 461 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 LAX1Q8IWV1 398 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 ADGRG2Q8IZP9 1017 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 C11orf65Q8NCR3 313 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 B3GNT7Q8NFL0 401 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PKP4Q99569 1192 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 HDHD2Q9H0R4 259 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 TRIM45Q9H8W5 580 aaPredicted RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 ADARB2Q9NS39 739 aaKnown RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 RLIMQ9NVW2 624 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 NDRG4Q9ULP0 352 aaKnown RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 PRELID1Q9Y255 219 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 SPEF1Q9Y4P9 236 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 HSPE1-MOB4S4R3N1 261 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 GRXCR2A6NFK2 248 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 SAP18O00422 153 aaKnown RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 DSCR3O14972 297 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 CLDN7O95471 211 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 JUNDP17535 347 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 POLR2EP19388 210 aaKnown RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 MYL9P24844 172 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 ATP5C1P36542 298 aaKnown RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 TGFBR2P37173 567 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PIK3CBP42338 1070 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 HTR3AP46098 478 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PTPN5P54829 565 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 CSNK2BP67870 215 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 NOXRED1Q6NXP6 359 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 FAM180BQ6P0A1 224 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 ANKS3Q6ZW76 656 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 GALNT13Q8IUC8 556 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 DNAJC22Q8N4W6 341 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 AQP11Q8NBQ7 271 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 OR8H1Q8NGG4 311 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 GRPEL2Q8TAA5 225 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PEX13Q92968 403 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PSKH2Q96QS6 385 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 DUSP26Q9BV47 211 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 ZNF717Q9BY31 904 aaPredicted RBP8.76□□□□□ -1.01
COPB1-202ENST00000439561 SLC22A4Q9H015 551 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 MAGEH1Q9H213 219 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PRKAB1Q9Y478 270 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PCDHGA6Q9Y5G7 932 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 PRSS21Q9Y6M0 314 aa8.76□□□□□ -1.01
COPB1-202ENST00000439561 GLYATL1P3A0A0U1RQE8 302 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms