RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 LRRC3Q9BY71 257 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 ZNF175Q9Y473 711 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 HRH3Q9Y5N1 445 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 EEFSECP57772 596 aaKnown RBP15.32■□□□□ 0.04
DHFR-201ENST00000439211 PCDH1Q08174 1060 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 SPOUT1Q5T280 376 aaKnown RBP15.32■□□□□ 0.04
DHFR-201ENST00000439211 B3GNT8Q7Z7M8 397 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 OR5K1Q8NHB7 308 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 KIAA1191Q96A73 305 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 FAM120BQ96EK7 910 aaKnown RBP15.32■□□□□ 0.04
DHFR-201ENST00000439211 L3HYPDHQ96EM0 354 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 KRT84Q9NSB2 600 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 IKZF3Q9UKT9 509 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 AGO1Q9UL18 857 aaKnown RBP15.32■□□□□ 0.04
DHFR-201ENST00000439211 EDARQ9UNE0 448 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 PLCL2Q9UPR0 1127 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 PCDHGB2Q9Y5G2 931 aa15.32■□□□□ 0.04
DHFR-201ENST00000439211 A0A1B0GTL3 188 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 ZNF865P0CJ78 1059 aaPredicted RBP15.31■□□□□ 0.04
DHFR-201ENST00000439211 TACR2P21452 398 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 FDXRP22570 491 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 ERVK-21P61565 698 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 CYP4F8P98187 520 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 CSTF3Q12996 717 aaKnown RBP15.31■□□□□ 0.04
DHFR-201ENST00000439211 CARNMT1Q8N4J0 409 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 SETD6Q8TBK2 473 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 TMEM125Q96AQ2 219 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 TEX37Q96LM6 180 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 ZNF416Q9BWM5 594 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 MED28Q9H204 178 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 SDR39U1Q9NRG7 319 aaPredicted RBP15.31■□□□□ 0.04
DHFR-201ENST00000439211 ANK1P16157 1881 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 ZFC3H1O60293 1989 aaKnown RBP15.31■□□□□ 0.04
DHFR-201ENST00000439211 PRSS44E7EML9 344 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 HPRP00739 348 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 S100A9P06702 114 aaKnown RBP15.31■□□□□ 0.04
DHFR-201ENST00000439211 PRKAR1AP10644 381 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 G6PDP11413 515 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 TTPAP49638 278 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 BHLHA9Q7RTU4 235 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 SNX20Q7Z614 316 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 LINC00518Q8N0U6 118 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 NUDT8Q8WV74 236 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 MS4A4AQ96JQ5 239 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 MYOCQ99972 504 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 CRLS1Q9UJA2 301 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 TRIP12Q14669 1992 aaPredicted RBP15.31■□□□□ 0.04
DHFR-201ENST00000439211 A0A0U1RQF3 1178 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 GPR39O43194 453 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 TLL1O43897 1013 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 PEX14O75381 377 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 RHOAP61586 193 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 RGS1Q08116 209 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 CPSF6Q16630 551 aaKnown RBP eCLIP15.31■□□□□ 0.04
DHFR-201ENST00000439211 VARS2Q5ST30 1063 aaKnown RBP15.31■□□□□ 0.04
DHFR-201ENST00000439211 LCN1P1Q5VSP4 162 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 FAM151BQ6UXP7 276 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 OR10Z1Q8NGY1 313 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 FCGR1BQ92637 280 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 COQ8BQ96D53 544 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 SUSD3Q96L08 255 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 SEC22CQ9BRL7 303 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 IPPKQ9H8X2 491 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 STARD7Q9NQZ5 370 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 NLKQ9UBE8 527 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 CYB5R1Q9UHQ9 305 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 MGAT4AQ9UM21 535 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 RAI2Q9Y5P3 530 aa15.31■□□□□ 0.04
DHFR-201ENST00000439211 CLDN24A6NM45 220 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 ORC5O43913 435 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 GMDSO60547 372 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 CD72P21854 359 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 PCMT1P22061 227 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 UGT2B15P54855 530 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 NKX3-2P78367 333 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 HMGCS1Q01581 520 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 DDX39BQ13838 428 aaKnown RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 COL19A1Q14993 1142 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 C6orf136Q5SQH8 315 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 IRAK1BP1Q5VVH5 260 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 FAM92BQ6ZTR7 304 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 SAMD14Q8IZD0 417 aaPredicted RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 TUBB1Q9H4B7 451 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 SMURF1Q9HCE7 757 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 ABT1Q9ULW3 272 aaKnown RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 ZFP37Q9Y6Q3 630 aaPredicted RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 A0A096LPI6 279 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 PRAMEF33A0A0G2JMD5 474 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 OR5K3A6NET4 321 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 SSX5O60225 188 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 PRAMEF10O60809 474 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 C21orf33P30042 268 aaPredicted RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 GDF5P43026 501 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 MASP1P48740 699 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 ATP4BP51164 291 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 YBEYP58557 167 aaPredicted RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 SERINC3Q13530 473 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 ZNF691Q5VV52 312 aa15.3■□□□□ 0.04
DHFR-201ENST00000439211 PAPD5Q8NDF8 572 aaKnown RBP15.3■□□□□ 0.04
DHFR-201ENST00000439211 NARS2Q96I59 477 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms