RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 SEC13P55735 322 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 CLDN8P56748 225 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 PFN3P60673 137 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 CNTN1Q12860 1018 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 SF1Q15637 639 aaKnown RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 CDKL4Q5MAI5 379 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 FRG2Q64ET8 278 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 XAF1Q6GPH4 301 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 TMEM53Q6P2H8 277 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 NUDT18Q6ZVK8 323 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 MTSS1LQ765P7 747 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 TCAIMQ8N3R3 496 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 RASGEF1AQ8N9B8 481 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 MED8Q96G25 268 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 MSLNLQ96KJ4 702 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 FRG2BQ96QU4 278 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 MTERF1Q99551 399 aaKnown RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 CD320Q9NPF0 282 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 C8orf4Q9NR00 106 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 CKAP5Q14008 2032 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 TNRC18O15417 2968 aaPredicted RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 TRBV5-3A0A0A0MS03 114 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 KRBA1A5PL33 1030 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 EIF3FO00303 357 aaPredicted RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 TSPAN6O43657 245 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 LZTS3O60299 673 aaPredicted RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 BCL10O95999 233 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 SOD1P00441 154 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 IL7RP16871 459 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 CD22P20273 847 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 OPRL1P41146 370 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 CTSCP53634 463 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 SLC14A1Q13336 389 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 AQP6Q13520 282 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 SPCS2Q15005 226 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 RGS21Q2M5E4 152 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 CCSMST1Q4G0I0 132 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 GGTA1PQ4G0N0 100 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 ANKRD34AQ69YU3 496 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 OR4F3Q6IEY1 312 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 RAVER1Q8IY67 606 aaKnown RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 MICU2Q8IYU8 434 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 AADATQ8N5Z0 425 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 ASZ1Q8WWH4 475 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 FAM120BQ96EK7 910 aaKnown RBP13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 SH3GL1Q99961 368 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 UGT2B28Q9BY64 529 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 F5P12259 2224 aa13.41□□□□□ -0.26
PTCHD3-201ENST00000438700 ARHGEF33A8MVX0 844 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 GNGT2O14610 69 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 NOBOXO60393 691 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 FTH1P02794 183 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 ALPLP05186 524 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 MPC1LP0DKB6 136 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 HLCSP50747 726 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 ALDH3A2P51648 485 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 IRF8Q02556 426 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 KCNC4Q03721 635 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 HTR4Q13639 388 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 NIPAL1Q6NVV3 410 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 ZDHHC13Q8IUH4 622 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 L3MBTL4Q8NA19 623 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 NETO1Q8TDF5 533 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 HDAC8Q9BY41 377 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 SMURF2Q9HAU4 748 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 MTCH2Q9Y6C9 303 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 U3KQV3 271 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 E7EQ34 232 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 G3V2T6 193 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 MAN1A2O60476 641 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 SERPINA1P01009 418 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 GSTT2BP0CG30 244 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 AMD1P17707 334 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 EFNA1P20827 205 aaPredicted RBP13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 TIE1P35590 1138 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 AP1S2P56377 157 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 ADARB1P78563 741 aaKnown RBP13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 TMEM115Q12893 351 aaPredicted RBP13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 SP140Q13342 867 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 DAG1Q14118 895 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 PON2Q15165 354 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 TMEM52BQ4KMG9 183 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 SYTL3Q4VX76 610 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 XKR6Q5GH73 641 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 PIP5KL1Q5T9C9 394 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 FAM46CQ5VWP2 391 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 RAET1GQ6H3X3 334 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 ADNP2Q6IQ32 1131 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 USP51Q70EK9 711 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 TMEM132CQ8N3T6 1108 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 SMRP1Q8NCR6 262 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 CSGALNACT1Q8TDX6 532 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 TRUB1Q8WWH5 349 aaKnown RBP13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 TAMM41Q96BW9 452 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 CMTM7Q96FZ5 175 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 CPPED1Q9BRF8 314 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms