RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CDK19Q9BWU1 502 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 CLEC7AQ9BXN2 247 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 KRTAP17-1Q9BYP8 105 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 NYXQ9GZU5 481 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 THAP2Q9H0W7 228 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 RIMS4Q9H426 269 aaPredicted RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 MAN2C1Q9NTJ4 1040 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 BARHL2Q9NY43 387 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 SLC12A6Q9UHW9 1150 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 ERRFI1Q9UJM3 462 aaPredicted RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 PA2G4Q9UQ80 394 aaKnown RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 SELENOKQ9Y6D0 94 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 UNC13AQ9UPW8 1703 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 ARID2Q68CP9 1835 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 C5orf52A6NGY3 159 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 C17orf105B2RV13 164 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 F8VVB4 439 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 F8VWA3 439 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 SLC30A4O14863 429 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 FLRT2O43155 660 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 ARHGEF9O43307 516 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 STX6O43752 255 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 FCGR3BO75015 233 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 NXPH2O95156 264 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 MOCS2O96007 188 aaPredicted RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 ATP1B1P05026 303 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 DESP17661 470 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 RPL35AP18077 110 aaKnown RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 TYMPP19971 482 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 CD27P26842 260 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 HLA-FP30511 346 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 KRT2P35908 639 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 LEPRP48357 1165 aaKnown RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 GMPSP49915 693 aaPredicted RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 ERVK11-1P61568 191 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 IL10RBQ08334 325 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 EFTUD2Q15029 972 aaKnown RBP eCLIP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 GPR33Q49SQ1 333 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 TXNRD3NBQ6F5E7 133 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 FAAP20Q6NZ36 180 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 TTC27Q6P3X3 843 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 SHQ1Q6PI26 577 aaKnown RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 PRSS55Q6UWB4 352 aaPredicted RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 FAM47EQ6ZV65 393 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 KLHL7Q8IXQ5 586 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 GPC2Q8N158 579 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 GBP7Q8N8V2 638 aaPredicted RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 OR4D10Q8NGI6 311 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 OR6S1Q8NH40 331 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 GOT1L1Q8NHS2 421 aaPredicted RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 NCOA7Q8NI08 942 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 GATAD1Q8WUU5 269 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 DNASE1L2Q92874 299 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 WBP2Q969T9 261 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 ART5Q96L15 291 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 NACAP1Q9BZK3 213 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 C10orf88Q9H8K7 445 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 PLCXD1Q9NUJ7 323 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 CHCHD3Q9NX63 227 aaKnown RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 KLHL8Q9P2G9 620 aaPredicted RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 ITGA11Q9UKX5 1188 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 EXOGQ9Y2C4 368 aaKnown RBP3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 PPP2R2CQ9Y2T4 447 aa3.31□□□□□ -1.88
LSM1P1-201ENST00000438629 NPHP3Q7Z494 1330 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 A0A087WUV0 522 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 TRIM64CA6NLI5 447 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 C15orf61A6NNL5 157 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 SNURFLB1AK76 121 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 FAM86B1E9PN63 330 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 NPIPA3F8WFD2 350 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 H0Y626 953 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 PPIP5K2O43314 1243 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 PRAF2O60831 178 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 ZG16O60844 167 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 SLU7O95391 586 aaKnown RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 RLN1P04808 185 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 YES1P07947 543 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 FAM86B2P0C5J1 330 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 THEGLP0DJG4 465 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 AADACP22760 399 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 CASQ1P31415 396 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 TIA1P31483 386 aaKnown RBP eCLIP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 PRKCIP41743 596 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 NKX2-1P43699 371 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 TSFMP43897 325 aaKnown RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 HUNKP57058 714 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 CYCSP99999 105 aaKnown RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 IFT88Q13099 833 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 PTK6Q13882 451 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 TMEM187Q14656 261 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 MTHFSDQ2M296 383 aaKnown RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 DNAJC21Q5F1R6 531 aaKnown RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 FAM166AQ6J272 317 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 CASC4Q6P4E1 433 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 BHLHB9Q6PI77 547 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 LEKR1Q6ZMV7 388 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 Q6ZSR9 355 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 CHMP1BQ7LBR1 199 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 ANKRD33Q7Z3H0 272 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 GPR141Q7Z602 305 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms