RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 MSI2Q96DH6 328 aaKnown RBP10.24□□□□□ -0.77
RTN4-211ENST00000438462 TSG101Q99816 390 aa10.24□□□□□ -0.77
RTN4-211ENST00000438462 XPO4Q9C0E2 1151 aaKnown RBP10.24□□□□□ -0.77
RTN4-211ENST00000438462 IL1RL2Q9HB29 575 aa10.24□□□□□ -0.77
RTN4-211ENST00000438462 ARL15Q9NXU5 204 aa10.24□□□□□ -0.77
RTN4-211ENST00000438462 PCDHA7Q9UN72 937 aa10.24□□□□□ -0.77
RTN4-211ENST00000438462 MAGED1Q9Y5V3 778 aaPredicted RBP10.24□□□□□ -0.77
RTN4-211ENST00000438462 TENM3Q9P273 2699 aa10.24□□□□□ -0.77
RTN4-211ENST00000438462 A0A0A6YYC8 382 aaPredicted RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 MBD3L3A6NE82 208 aaPredicted RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 SOWAHDA6NJG2 315 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 ELOA3DA6NLF2 546 aaPredicted RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 AHRRA9YTQ3 701 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 I3L1I5 382 aaPredicted RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 FOXN3O00409 490 aaPredicted RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 AURKAO14965 403 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 SGTAO43765 313 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 CYC1P08574 325 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 CD86P42081 329 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 CD151P48509 253 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 CCR8P51685 355 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 NOMO3P69849 1222 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 ACTN3Q08043 901 aaPredicted RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 TYSND1Q2T9J0 566 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 ELOA3BQ3SY89 546 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 CLEC2AQ6UVW9 174 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 LYPD8Q6UX82 237 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 PEG10Q86TG7 708 aaKnown RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 TAX1BP1Q86VP1 789 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 ELOA3Q8NG57 546 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 MBD3L2Q8NHZ7 208 aaPredicted RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 AKAP1Q92667 903 aaKnown RBP eCLIP10.23□□□□□ -0.77
RTN4-211ENST00000438462 TRIB1Q96RU8 372 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 RBM4Q9BWF3 364 aaKnown RBP10.23□□□□□ -0.77
RTN4-211ENST00000438462 ADGRE3Q9BY15 652 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 SLC6A15Q9H2J7 730 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 IL26Q9NPH9 171 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.23□□□□□ -0.773e-8■■■■□ 23.3
RTN4-211ENST00000438462 SCINQ9Y6U3 715 aa10.23□□□□□ -0.77
RTN4-211ENST00000438462 RYR1P21817 5038 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 TRIM77I1YAP6 450 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 LSM8O95777 96 aaKnown RBP10.22□□□□□ -0.77
RTN4-211ENST00000438462 MYL1P05976 194 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 SLC25A16P16260 332 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 LSM11P83369 360 aaKnown RBP eCLIP10.22□□□□□ -0.77
RTN4-211ENST00000438462 DPYSQ14117 519 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 PRTGQ2VWP7 1150 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 PPP6R3Q5H9R7 873 aaPredicted RBP10.22□□□□□ -0.77
RTN4-211ENST00000438462 TRIM65Q6PJ69 517 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 WDR59Q6PJI9 974 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 Q6ZPA2 131 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 SH2D5Q6ZV89 423 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 LMNTD1Q8N9Z9 388 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 C9orf106Q8NAJ2 232 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 ANKRD9Q96BM1 317 aaPredicted RBP10.22□□□□□ -0.77
RTN4-211ENST00000438462 SCYL1Q96KG9 808 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 SFXN3Q9BWM7 321 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 MAGEE1Q9HCI5 957 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 ERVK-11Q9UQG0 969 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 PCDHA13Q9Y5I0 950 aa10.22□□□□□ -0.77
RTN4-211ENST00000438462 KPNA5O15131 536 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 FOXS1O43638 330 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 KRT3P12035 628 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 CES1P23141 567 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 NUDT6P53370 316 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 FAPQ12884 760 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 RESP18Q5W5W9 173 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 C2orf73Q8N5S3 287 aaPredicted RBP10.21□□□□□ -0.77
RTN4-211ENST00000438462 LINC01555Q8NAE3 123 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 FAM81BQ96LP2 452 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 FAM173AQ9BQD7 235 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 BHLHE41Q9C0J9 482 aaPredicted RBP10.21□□□□□ -0.77
RTN4-211ENST00000438462 LUC7LQ9NQ29 371 aaKnown RBP10.21□□□□□ -0.77
RTN4-211ENST00000438462 ETNK2Q9NVF9 386 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 METRNQ9UJH8 293 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 DNAJC12Q9UKB3 198 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 RUVBL1Q9Y265 456 aaKnown RBP10.21□□□□□ -0.77
RTN4-211ENST00000438462 PTGDR2Q9Y5Y4 395 aa10.21□□□□□ -0.77
RTN4-211ENST00000438462 CD8B2A6NJW9 211 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 A8MXE2 369 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 HLA-DQB2P05538 268 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 MMP2P08253 660 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 DANCRP0C864 163 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 PKLRP30613 574 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 PRLHRP49683 370 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 DOC2BQ14184 412 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 ABRAXAS2Q15018 415 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 HKDC1Q2TB90 917 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 BEX5Q5H9J7 111 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 RNF44Q7L0R7 432 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 MILR1Q7Z6M3 343 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 ARMC10Q8N2F6 343 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 ENOX1Q8TC92 643 aaKnown RBP10.2□□□□□ -0.78
RTN4-211ENST00000438462 TSLPQ969D9 159 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 CRACR2AQ9BSW2 395 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 SNRNP25Q9BV90 132 aaKnown RBP10.2□□□□□ -0.78
RTN4-211ENST00000438462 DRC3Q9H069 523 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 SMOXQ9NWM0 555 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 ASF1AQ9Y294 204 aa10.2□□□□□ -0.78
RTN4-211ENST00000438462 SPO11Q9Y5K1 396 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms