RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 CYTH2Q99418 400 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 FMO2Q99518 471 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 CRB3Q9BUF7 120 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 HELZ2Q9BYK8 2649 aaKnown RBP14.45□□□□□ -0.1
LIMS3-201ENST00000437679 SEMA3GQ9NS98 782 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 NINJ2Q9NZG7 142 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 TRPC4Q9UBN4 977 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 ANAPC2Q9UJX6 822 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 SLC22A14Q9Y267 594 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 KCNE2Q9Y6J6 123 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 BSNQ9UPA5 3926 aa14.45□□□□□ -0.1
LIMS3-201ENST00000437679 BAHCC1Q9P281 2608 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 A0A0A6YYC8 382 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-201ENST00000437679 TRBC2A0A5B9 178 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 A6NL46 340 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 I3L1I5 382 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-201ENST00000437679 K7EM74 188 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 AGPSO00116 658 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 OR1F1O43749 312 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 LCMT2O60294 686 aaKnown RBP14.44□□□□□ -0.1
LIMS3-201ENST00000437679 ZGLP1P0C6A0 271 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 SLC35G6P0C7Q6 338 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 CD1DP15813 335 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 SLC26A3P40879 764 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 KLRB1Q12918 225 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 TGFBIQ15582 683 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 UAP1Q16222 522 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-201ENST00000437679 RBBP7Q16576 425 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 DCAF10Q5QP82 559 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 CATSPEREQ5SY80 951 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 TBC1D1Q86TI0 1168 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-201ENST00000437679 TMEM151BQ8IW70 566 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 PRSS58Q8IYP2 241 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 ARHGEF39Q8N4T4 335 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 TEX19Q8NA77 164 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 OR4K1Q8NGD4 311 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 SLC13A3Q8WWT9 602 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 RHBDF1Q96CC6 855 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 TM4SF19Q96DZ7 209 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 MRRFQ96E11 262 aaKnown RBP14.44□□□□□ -0.1
LIMS3-201ENST00000437679 PELI2Q9HAT8 420 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 MKKSQ9NPJ1 570 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-201ENST00000437679 MAP4K5Q9Y4K4 846 aa14.44□□□□□ -0.1
LIMS3-201ENST00000437679 IGLV3-12A0A075B6K2 115 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 NCF1BA6NI72 391 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 NCF1CA8MVU1 366 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 J3QKU1 62 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 FOXS1O43638 330 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 KLHL41O60662 606 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 CEACAM4O75871 244 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 WDR47O94967 919 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 S100BP04271 92 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 NCF1P14598 390 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 MEF2AQ02078 507 aaPredicted RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 KLC1Q07866 573 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 VWA2Q5GFL6 755 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 CDKL4Q5MAI5 379 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 MROH9Q5TGP6 573 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 TMEM214Q6NUQ4 689 aaKnown RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 NXPE4Q6UWF7 544 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 CCDC91Q7Z6B0 441 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 CMC1Q7Z7K0 106 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 TMPRSS11BQ86T26 416 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 FDCSPQ8NFU4 85 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 KIAA1191Q96A73 305 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 UBXN10Q96LJ8 280 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 MACROD1Q9BQ69 325 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 AIF1LQ9BQI0 150 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 SARGQ9BW04 601 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 CDC42EP4Q9H3Q1 356 aaKnown RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 CNOT10Q9H9A5 744 aaKnown RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 NMRAL1Q9HBL8 299 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 ANKHQ9HCJ1 492 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 ATP13A2Q9NQ11 1180 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 C14orf105Q9NVL8 296 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 GPR83Q9NYM4 423 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 WWOXQ9NZC7 414 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 CD274Q9NZQ7 290 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 C3orf18Q9UK00 162 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 FBXL4Q9UKA2 621 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 RNF112Q9ULX5 631 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 ZNF451Q9Y4E5 1061 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 PCDHGB7Q9Y5F8 929 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 HS3ST3B1Q9Y662 390 aa14.43□□□□□ -0.1
LIMS3-201ENST00000437679 TNRC6AQ8NDV7 1962 aaKnown RBP14.43□□□□□ -0.1
LIMS3-201ENST00000437679 NUP210LQ5VU65 1888 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 PCSK5Q92824 1860 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 H0YIG0 161 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 FFAR3O14843 346 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 GPR42O15529 346 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 H2AFYO75367 372 aaKnown RBP14.42□□□□□ -0.1
LIMS3-201ENST00000437679 IPO13O94829 963 aaKnown RBP14.42□□□□□ -0.1
LIMS3-201ENST00000437679 NSA2O95478 260 aaKnown RBP14.42□□□□□ -0.1
LIMS3-201ENST00000437679 ACSL3O95573 720 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 PDGFAP04085 211 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 SERPIND1P05546 499 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 SLC35E2BP0CK96 405 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 GNAZP19086 355 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 SLC6A12P48065 614 aa14.42□□□□□ -0.1
LIMS3-201ENST00000437679 REEP5Q00765 189 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms