RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 EEF1B2P24534 225 aaKnown RBP2.57□□□□□ -2
HMGB1P31-201ENST00000437242 PCGF2P35227 344 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 PPP5CP53041 499 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 CYCSP99999 105 aaKnown RBP2.57□□□□□ -2
HMGB1P31-201ENST00000437242 PNRC1Q12796 327 aaPredicted RBP2.57□□□□□ -2
HMGB1P31-201ENST00000437242 RALGDSQ12967 914 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 C15orf32Q32M92 178 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 MOGAT2Q3SYC2 334 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 C1orf141Q5JVX7 400 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 KRT77Q7Z794 578 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 SLC47A2Q86VL8 602 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 IQCHQ86VS3 1027 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 ZNF595Q8IYB9 648 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 CPSF7Q8N684 471 aaKnown RBP2.57□□□□□ -2
HMGB1P31-201ENST00000437242 Q8N7P7 452 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.57□□□□□ -2
HMGB1P31-201ENST00000437242 SMAP2Q8WU79 429 aaPredicted RBP2.57□□□□□ -2
HMGB1P31-201ENST00000437242 TEKT4Q8WW24 435 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 RADILQ96JH8 1075 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 ABHD6Q9BV23 337 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 SLC25A23Q9BV35 468 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 DPAGT1Q9H3H5 408 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 A4GALTQ9NPC4 353 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 PRMT7Q9NVM4 692 aaPredicted RBP2.57□□□□□ -2
HMGB1P31-201ENST00000437242 C5AR2Q9P296 337 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 RHCGQ9UBD6 479 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 GIMAP2Q9UG22 337 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 ZHX1Q9UKY1 873 aaPredicted RBP2.57□□□□□ -2
HMGB1P31-201ENST00000437242 MSH6P52701 1360 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 CCNB3Q8WWL7 1395 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 RTEL1-TNFRSF6BF6WH68 1400 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 SETD5Q9C0A6 1442 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 RALGAPBQ86X10 1494 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 EHBP1L1Q8N3D4 1523 aa2.57□□□□□ -2
HMGB1P31-201ENST00000437242 RGPD1P0DJD0 1748 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 SPHKAPQ2M3C7 1700 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 CASZ1Q86V15 1759 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 TMEM221A6NGB7 291 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 ACOD1A6NK06 481 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 OR10H2O60403 315 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 RNASEH1O60930 286 aaKnown RBP2.56□□□□□ -2
HMGB1P31-201ENST00000437242 RECQL5O94762 991 aaPredicted RBP2.56□□□□□ -2
HMGB1P31-201ENST00000437242 RAB40ALP0C0E4 278 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 ERCC2P18074 760 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 PRKACGP22612 351 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 PIK3R1P27986 724 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 ZNF41P51814 821 aaPredicted RBP2.56□□□□□ -2
HMGB1P31-201ENST00000437242 LIMK1P53667 647 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 TMEM50BP56557 158 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 IDI1Q13907 227 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 COG2Q14746 738 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 LETM2Q2VYF4 491 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 TMPRSS11FQ6ZWK6 438 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 CENPVQ7Z7K6 275 aaPredicted RBP2.56□□□□□ -2
HMGB1P31-201ENST00000437242 SLFN11Q7Z7L1 901 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 KRTAP11-1Q8IUC1 163 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.56□□□□□ -2
HMGB1P31-201ENST00000437242 OR10G8Q8NGN5 311 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 OR2AJ1Q8NGZ0 328 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 VANGL1Q8TAA9 524 aaPredicted RBP2.56□□□□□ -2
HMGB1P31-201ENST00000437242 CCDC107Q8WV48 283 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 VPS33AQ96AX1 596 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 NXNL1Q96CM4 212 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 FNDC11Q9BVV2 318 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 GOLPH3LQ9H4A5 285 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 CNOT10Q9H9A5 744 aaKnown RBP2.56□□□□□ -2
HMGB1P31-201ENST00000437242 WDR35Q9P2L0 1181 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 SLC24A2Q9UI40 661 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 GRID1Q9ULK0 1009 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.56□□□□□ -2
HMGB1P31-201ENST00000437242 MYOM2P54296 1465 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 NRKQ7Z2Y5 1582 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 SHANK3Q9BYB0 1731 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 CRYBG1Q9Y4K1 1723 aa2.56□□□□□ -2
HMGB1P31-201ENST00000437242 A0A1W2PPQ1 181 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 FEZF1A0PJY2 475 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 ASB14A6NK59 587 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 SRRM5B3KS81 715 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 PTGESO14684 152 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 PHOX2AO14813 284 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 DFFBO76075 338 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 CYP2A7P20853 494 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 DNASE1P24855 282 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 NOS1P29475 1434 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 GABRA5P31644 462 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 MC5RP33032 325 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 LEPRP48357 1165 aaKnown RBP2.55□□□□□ -2
HMGB1P31-201ENST00000437242 ASCL1P50553 236 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 BLMP54132 1417 aaPredicted RBP2.55□□□□□ -2
HMGB1P31-201ENST00000437242 HERV-K104P61576 105 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 CX3CL1P78423 397 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 DLK1P80370 383 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 TFCP2Q12800 502 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 LY6DQ14210 128 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 HYAL4Q2M3T9 481 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 MDH1BQ5I0G3 518 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 KRBOX4Q5JUW0 171 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 RNASEH2BQ5TBB1 312 aaKnown RBP2.55□□□□□ -2
HMGB1P31-201ENST00000437242 PRR27Q6MZM9 219 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 ERN2Q76MJ5 926 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms