RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SERPINA6P08185 405 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 CDH3P22223 829 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 PRPH2P23942 346 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 DAB2P98082 770 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 HMGCS1Q01581 520 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 RELAQ04206 551 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 NKAIN2Q5VXU1 208 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 FCRL6Q6DN72 434 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 RNF175Q8N4F7 328 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 Q8N9G6 341 aaPredicted RBP22.06■■□□□ 1.12
CPSF4-204ENST00000436336 BAHD1Q8TBE0 780 aaPredicted RBP22.06■■□□□ 1.12
CPSF4-204ENST00000436336 ZDHHC12Q96GR4 267 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 PPM1MQ96MI6 270 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 CD180Q99467 661 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 EDEM2Q9BV94 578 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 DMRT3Q9NQL9 472 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 ASXL3Q9C0F0 2248 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 GPR179Q6PRD1 2367 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 UNC13CQ8NB66 2214 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 LCMT2O60294 686 aaKnown RBP22.05■■□□□ 1.12
CPSF4-204ENST00000436336 NRP2O60462 931 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 PEX11AO75192 247 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 EZRP15311 586 aaKnown RBP22.05■■□□□ 1.12
CPSF4-204ENST00000436336 RPS15AP62244 130 aaKnown RBP22.05■■□□□ 1.12
CPSF4-204ENST00000436336 SPDYAQ5MJ70 313 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 OGFOD2Q6N063 350 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 MTDHQ86UE4 582 aaKnown RBP22.05■■□□□ 1.12
CPSF4-204ENST00000436336 PLD3Q8IV08 490 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 LRRC37BQ96QE4 947 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 PRM3Q9NNZ6 103 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 GIMAP2Q9UG22 337 aa22.05■■□□□ 1.12
CPSF4-204ENST00000436336 PVRP15151 417 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 CD1CP29017 333 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 AHRP35869 848 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 RPS13P62277 151 aaKnown RBP22.04■■□□□ 1.12
CPSF4-204ENST00000436336 SMU1Q2TAY7 513 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 AMZ1Q400G9 498 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 GALNTL6Q49A17 601 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 C6orf136Q5SQH8 315 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 PERM1Q5SV97 790 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 CHSY3Q70JA7 882 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 VN1R5Q7Z5H4 357 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 PLXDC1Q8IUK5 500 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 MFSD9Q8NBP5 474 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 TMEM9BQ9NQ34 198 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 NMRK1Q9NWW6 199 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 VPS29Q9UBQ0 182 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 ZFP69BQ9UJL9 534 aa22.04■■□□□ 1.12
CPSF4-204ENST00000436336 TLCD2A6NGC4 264 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 NCF2P19878 526 aaPredicted RBP22.03■■□□□ 1.12
CPSF4-204ENST00000436336 BCL6P41182 706 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 GFERP55789 205 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 SQSTM1Q13501 440 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 AP5B1Q2VPB7 878 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 FAM92BQ6ZTR7 304 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 CARFQ8N187 725 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 CMTM7Q96FZ5 175 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 TGM7Q96PF1 710 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 TRAPPC9Q96Q05 1148 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 MAP3K3Q99759 626 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 CCDC3Q9BQI4 270 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 LRTM1Q9HBL6 345 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 C1orf109Q9NX04 203 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 SLC12A4Q9UP95 1085 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 PCDHGA4Q9Y5G9 962 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 AP1M2Q9Y6Q5 423 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 MN1Q10571 1320 aaPredicted RBP22.03■■□□□ 1.12
CPSF4-204ENST00000436336 UBDO15205 165 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 CLEC3AO75596 197 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 C9P02748 559 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 ST6GAL1P15907 406 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 ERVK-8P63133 956 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 TMEM198Q66K66 360 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 FBXO42Q6P3S6 717 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 WDR74Q6RFH5 385 aaPredicted RBP22.03■■□□□ 1.12
CPSF4-204ENST00000436336 SPATA19Q7Z5L4 167 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 RHBDD1Q8TEB9 315 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 METTL2AQ96IZ6 378 aaKnown RBP22.03■■□□□ 1.12
CPSF4-204ENST00000436336 SERPINI1Q99574 410 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 NMUR2Q9GZQ4 415 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 ZMYND15Q9H091 742 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 KLHL25Q9H0H3 589 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 MYLK2Q9H1R3 596 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 PILRAQ9UKJ1 303 aa22.03■■□□□ 1.12
CPSF4-204ENST00000436336 FCHO1O14526 889 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 SLC34A2O95436 690 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 LDOC1O95751 146 aaPredicted RBP22.02■■□□□ 1.12
CPSF4-204ENST00000436336 HOXB3P14651 431 aaPredicted RBP22.02■■□□□ 1.12
CPSF4-204ENST00000436336 PTX3P26022 381 aaPredicted RBP22.02■■□□□ 1.12
CPSF4-204ENST00000436336 MAD2L1Q13257 205 aaPredicted RBP22.02■■□□□ 1.12
CPSF4-204ENST00000436336 TRPM8Q7Z2W7 1104 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 ZFAND4Q86XD8 727 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 C19orf47Q8N9M1 422 aaKnown RBP22.02■■□□□ 1.12
CPSF4-204ENST00000436336 FNDC5Q8NAU1 212 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 TRPV3Q8NET8 790 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 IFI44Q8TCB0 444 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 THAP11Q96EK4 314 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 CNDP2Q96KP4 475 aaKnown RBP22.02■■□□□ 1.12
CPSF4-204ENST00000436336 CATSPER2Q96P56 530 aa22.02■■□□□ 1.12
CPSF4-204ENST00000436336 MS4A8Q9BY19 250 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms