RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TM4SF19Q96DZ7 209 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 ATG10Q9H0Y0 220 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 TMEM184CQ9NVA4 438 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 RIC8BQ9NVN3 520 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 KCNE1BA0A087WTH5 132 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 FEZF1A0PJY2 475 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 PGRMC1O00264 195 aaKnown RBP14.68□□□□□ -0.06
SEC13-210ENST00000428626 NSA2O95478 260 aaKnown RBP14.68□□□□□ -0.06
SEC13-210ENST00000428626 TSPAN12O95859 305 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 WDPCPO95876 746 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 BCL6P41182 706 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 KCNK10P57789 538 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 DHX9Q08211 1270 aaKnown RBP14.68□□□□□ -0.06
SEC13-210ENST00000428626 TMEM214Q6NUQ4 689 aaKnown RBP14.68□□□□□ -0.06
SEC13-210ENST00000428626 FAM180AQ6UWF9 173 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 LMNTD2Q8IXW0 634 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 PPIL6Q8IXY8 311 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 SLC35F6Q8N357 371 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 KCT2Q8NC54 265 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 OSBPL9Q96SU4 736 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 WDR83Q9BRX9 315 aaKnown RBP14.68□□□□□ -0.06
SEC13-210ENST00000428626 FAM167BQ9BTA0 163 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 CCDC177Q9NQR7 707 aaPredicted RBP14.68□□□□□ -0.06
SEC13-210ENST00000428626 OLAHQ9NV23 265 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 UTP6Q9NYH9 597 aaKnown RBP14.68□□□□□ -0.06
SEC13-210ENST00000428626 HCN3Q9P1Z3 774 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 COMMD10Q9Y6G5 202 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 ABCA12Q86UK0 2595 aa14.68□□□□□ -0.06
SEC13-210ENST00000428626 DYTNA2CJ06 578 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 SGK494L7N484 410 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 EIF3FO00303 357 aaPredicted RBP14.67□□□□□ -0.06
SEC13-210ENST00000428626 TXNDC9O14530 226 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 ZG16O60844 167 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 DNAJB6O75190 326 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 SEC24DO94855 1032 aaPredicted RBP14.67□□□□□ -0.06
SEC13-210ENST00000428626 AHSGP02765 367 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 STSP08842 583 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 C8orf89P0DMQ9 161 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 FDXRP22570 491 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 ST13P50502 369 aaKnown RBP14.67□□□□□ -0.06
SEC13-210ENST00000428626 NAE1Q13564 534 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 HIBCHQ6NVY1 386 aaPredicted RBP14.67□□□□□ -0.06
SEC13-210ENST00000428626 AGTRAPQ6RW13 159 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 RIPOR1Q6ZS17 1223 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 SLC26A11Q86WA9 606 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 BCORP1Q8N888 145 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 OR51Q1Q8NH59 317 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 ZCCHC10Q8TBK6 192 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 CALML6Q8TD86 181 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 ACTRT1Q8TDG2 376 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 MAGEB10Q96LZ2 347 aaPredicted RBP14.67□□□□□ -0.06
SEC13-210ENST00000428626 PWWP2AQ96N64 755 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 CYTH2Q99418 400 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 EBNA1BP2Q99848 306 aaKnown RBP14.67□□□□□ -0.06
SEC13-210ENST00000428626 SGPP1Q9BX95 441 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 TRMT6Q9UJA5 497 aaKnown RBP14.67□□□□□ -0.06
SEC13-210ENST00000428626 IKZF3Q9UKT9 509 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 PCNX1Q96RV3 2341 aa14.67□□□□□ -0.06
SEC13-210ENST00000428626 TRAV17A0A0B4J275 112 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 CTAGE15A4D2H0 777 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 H0YIG0 161 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 PCDH17O14917 1159 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 NRDCO43847 1150 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 WFS1O76024 890 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 CDH1P12830 882 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 NPPBP16860 134 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 PGAM1P18669 254 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 IVDP26440 423 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 MST1P26927 711 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 XCR1P46094 333 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 AVPR1BP47901 424 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 FNTAP49354 379 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 RPS15AP62244 130 aaKnown RBP14.66□□□□□ -0.06
SEC13-210ENST00000428626 ZRSR2Q15696 482 aaKnown RBP14.66□□□□□ -0.06
SEC13-210ENST00000428626 NDUFA9Q16795 377 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 C1QL3Q5VWW1 255 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 FCRLBQ6BAA4 426 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 CTAGE6Q86UF2 777 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 FJX1Q86VR8 437 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 CNTN4Q8IWV2 1026 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 MCOLN3Q8TDD5 553 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 NR4A3Q92570 626 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 ALKBH8Q96BT7 664 aaKnown RBP14.66□□□□□ -0.06
SEC13-210ENST00000428626 PYCR2Q96C36 320 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 MOCOSQ96EN8 888 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 OR4K3Q96R72 315 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 NPAS2Q99743 824 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 TUBB6Q9BUF5 446 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 DDX47Q9H0S4 455 aaKnown RBP14.66□□□□□ -0.06
SEC13-210ENST00000428626 SPNS1Q9H2V7 528 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 PARVBQ9HBI1 364 aa14.66□□□□□ -0.06
SEC13-210ENST00000428626 ZNF860A6NHJ4 632 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 DNALI1O14645 258 aaPredicted RBP14.65□□□□□ -0.06
SEC13-210ENST00000428626 MAN1A2O60476 641 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 RDH16O75452 317 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 B3GALT4O96024 378 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 C8GP07360 202 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 HRH2P25021 359 aa14.65□□□□□ -0.06
SEC13-210ENST00000428626 MEF2AQ02078 507 aaPredicted RBP14.65□□□□□ -0.06
SEC13-210ENST00000428626 PTK6Q13882 451 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms