RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 STAT5AP42229 794 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 NR0B1P51843 470 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 PDX1P52945 283 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 PNLIPRP1P54315 467 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 PPP3R1P63098 170 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 LIN54Q6MZP7 749 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 NOXRED1Q6NXP6 359 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 WDTC1Q8N5D0 677 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 CNTD1Q8N815 330 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 ZNF527Q8NB42 609 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 DDX1Q92499 740 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 TMEM203Q969S6 136 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 FCRL3Q96P31 734 aaPredicted RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 USP29Q9HBJ7 922 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 PLCL2Q9UPR0 1127 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 MYH11P35749 1972 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 SMIM30A4D0T7 59 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 MANBAO00462 879 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 PITPNM1O00562 1244 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 SMAD9O15198 467 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 ZNF208O43345 1280 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 MATN1P21941 496 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 ATP5A1P25705 553 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 SLC10A2Q12908 348 aaPredicted RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 TMEM31Q5JXX7 168 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 DRICH1Q6PGQ1 229 aaPredicted RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 HSDL2Q6YN16 418 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 TMEM125Q96AQ2 219 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 PRR11Q96HE9 360 aaPredicted RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 PTCHD1Q96NR3 888 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 OR2M4Q96R27 311 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 EFCAB11Q9BUY7 163 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 EBF2Q9HAK2 575 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 FBRSL1Q9HCM7 1045 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 SERINC1Q9NRX5 453 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 SAGE1Q9NXZ1 904 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 P2RX2Q9UBL9 471 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 GJD2Q9UKL4 321 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 C11orf98E9PRG8 122 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 TOR1BO14657 336 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 S100GP29377 79 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 OR1E2P47887 323 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 HCAR3P49019 387 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 QPRTQ15274 297 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 TGFBIQ15582 683 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 PPP1R3AQ16821 1122 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 CARD17Q5XLA6 110 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 THAP5Q7Z6K1 395 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 CAPSLQ8WWF8 208 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 KLHL31Q9H511 634 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 COQ10BQ9H8M1 238 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 LMAN1LQ9HAT1 526 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 DLGAP4Q9Y2H0 992 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 MYH1P12882 1939 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 KDM3BQ7LBC6 1761 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 PRRC2BQ5JSZ5 2229 aaKnown RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 FAM234BA2RU67 622 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 RENP00797 406 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 OTX2P32243 289 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 HSD17B2P37059 387 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 STC1P52823 247 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 HADHBP55084 474 aaKnown RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 CLDN2P57739 230 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 DMPKQ09013 629 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 CYP1B1Q16678 543 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 C18orf21Q32NC0 220 aaPredicted RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 DEFB134Q4QY38 66 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 FAXDC2Q96IV6 333 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 B3GNT4Q9C0J1 378 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 COL2A1P02458 1487 aaPredicted RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 A6NL46 340 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 ADAMDEC1O15204 470 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 PAPSS2O95340 614 aaPredicted RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 EDNRBP24530 442 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 PTGES3Q15185 160 aaKnown RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 CST6Q15828 149 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 DENND5AQ6IQ26 1287 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 PJA1Q8NG27 643 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 MCFD2Q8NI22 146 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 TCEAL4Q96EI5 215 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 TRIM2Q9C040 744 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 DENND2DQ9H6A0 471 aaPredicted RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 RSL24D1Q9UHA3 163 aaKnown RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 DNAJC25-GNG10A0A024R161 153 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 FAM221BA6H8Z2 402 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 AGPSO00116 658 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 C6P13671 934 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 PRPS1L1P21108 318 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 WDR4P57081 412 aaKnown RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 ZNF846Q147U1 533 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 RNF130Q86XS8 419 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 DCUN1D3Q8IWE4 304 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 GLYATL1Q969I3 302 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 GINS4Q9BRT9 223 aa9.43□□□□□ -0.9
SNX13-203ENST00000428135 NUSAP1Q9BXS6 441 aaKnown RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 POLR2J3Q9H1A7 115 aaKnown RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 NLE1Q9NVX2 485 aaPredicted RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 SMPD3Q9NY59 655 aaPredicted RBP9.43□□□□□ -0.9
SNX13-203ENST00000428135 LGALS13Q9UHV8 139 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms