RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ATG9BQ674R7 924 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 LCTLQ6UWM7 567 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 Q6ZS92 163 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 CAPN12Q6ZSI9 719 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 CUZD1Q86UP6 607 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 SHISA5Q8N114 240 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 CISD2Q8N5K1 135 aaKnown RBP17.46■□□□□ 0.39
PSPC1-202ENST00000427943 AGAP4Q96P64 663 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 WDR77Q9BQA1 342 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-202ENST00000427943 SLC29A3Q9BZD2 475 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 PCBD2Q9H0N5 130 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 MKKSQ9NPJ1 570 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-202ENST00000427943 ASF1BQ9NVP2 202 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 VWA7Q9Y334 891 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 UTP20O75691 2785 aaKnown RBP17.46■□□□□ 0.39
PSPC1-202ENST00000427943 NSG1A0A0A6YYJ2 146 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 JRKO75564 520 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 AVPR1BP47901 424 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 GLRBP48167 497 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 MGAT5Q09328 741 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 FAM53BQ14153 422 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 ZNF460Q14592 562 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 CAPN13Q6MZZ7 669 aaPredicted RBP17.45■□□□□ 0.38
PSPC1-202ENST00000427943 TMEM207Q6UWW9 146 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 LINC00696Q6ZRV3 163 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 PPP4R1Q8TF05 950 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 CNDP1Q96KN2 507 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 DPH5Q9H2P9 285 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 EPS8L2Q9H6S3 715 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 HCN3Q9P1Z3 774 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 MKL2Q9ULH7 1088 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 HIVEP3Q5T1R4 2406 aa17.45■□□□□ 0.38
PSPC1-202ENST00000427943 FAM95CA0A1B0GW59 222 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 BLACEA4D250 179 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 E7ESA3 106 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 LCMT2O60294 686 aaKnown RBP17.44■□□□□ 0.38
PSPC1-202ENST00000427943 AGFG2O95081 481 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 CELA2AP08217 269 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 NPPBP16860 134 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 ZNF37AP17032 561 aaPredicted RBP17.44■□□□□ 0.38
PSPC1-202ENST00000427943 CXCR2P25025 360 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 VARSP26640 1264 aaKnown RBP17.44■□□□□ 0.38
PSPC1-202ENST00000427943 FHL5Q5TD97 284 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 MFSD4BQ5TF39 518 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 STRA8Q7Z7C7 330 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 SLC26A11Q86WA9 606 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 ZC3HC1Q86WB0 502 aaKnown RBP17.44■□□□□ 0.38
PSPC1-202ENST00000427943 ZBED8Q8IZ13 594 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 AMER2Q8N7J2 671 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 KCT2Q8NC54 265 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 HAUS8Q9BT25 410 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 TRIM54Q9BYV2 358 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 TGIF2Q9GZN2 237 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 RNF14Q9UBS8 474 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 NOVA2Q9UNW9 492 aaKnown RBP17.44■□□□□ 0.38
PSPC1-202ENST00000427943 NTNG1Q9Y2I2 539 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 PCDHGA10Q9Y5H3 936 aa17.44■□□□□ 0.38
PSPC1-202ENST00000427943 KCNE1BA0A087WTH5 132 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 IGHV1-45A0A0A0MS14 117 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 NPEPPSL1A6NEC2 478 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 H0YIG0 161 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 PIAS1O75925 651 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 KLHL18O94889 574 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 NSA2O95478 260 aaKnown RBP17.43■□□□□ 0.38
PSPC1-202ENST00000427943 GRK3P35626 688 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 AP1S2P56377 157 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 C2orf54Q08AI8 447 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 FRG1Q14331 258 aaKnown RBP17.43■□□□□ 0.38
PSPC1-202ENST00000427943 NR6A1Q15406 480 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 DUPD1Q68J44 220 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 TMEM214Q6NUQ4 689 aaKnown RBP17.43■□□□□ 0.38
PSPC1-202ENST00000427943 SBSNQ6UWP8 590 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 IGFL2Q6UWQ7 119 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 NDUFAF7Q7L592 441 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 ASPGQ86U10 573 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 KBTBD2Q8IY47 623 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 C17orf53Q8N3J3 647 aaPredicted RBP17.43■□□□□ 0.38
PSPC1-202ENST00000427943 CAMKVQ8NCB2 501 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 OR56A3Q8NH54 315 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 FBXL8Q96CD0 374 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 TM4SF19Q96DZ7 209 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 THAP11Q96EK4 314 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 OR4K3Q96R72 315 aa17.43■□□□□ 0.38
PSPC1-202ENST00000427943 USP9YO00507 2555 aaPredicted RBP17.42■□□□□ 0.38
PSPC1-202ENST00000427943 SGK494L7N484 410 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 CDC7O00311 574 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 BMP10O95393 424 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 PRR35P0CG20 571 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 CCR8P51685 355 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 TAS2R39P59534 338 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 MFAP5Q13361 173 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 PCOLCEQ15113 449 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 PPP1R3AQ16821 1122 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 EIF2S3LQ2VIR3 472 aaKnown RBP17.42■□□□□ 0.38
PSPC1-202ENST00000427943 CRB2Q5IJ48 1285 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 CATSPEREQ5SY80 951 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 ISLR2Q6UXK2 745 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 SIRT6Q8N6T7 355 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 MFSD9Q8NBP5 474 aa17.42■□□□□ 0.38
PSPC1-202ENST00000427943 DNAJB14Q8TBM8 379 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms