RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TRMT1LQ7Z2T5 733 aaKnown RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 GALNT7Q86SF2 657 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 PRUNE1Q86TP1 453 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 LCA5Q86VQ0 697 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TMEM200AQ86VY9 491 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TMEM126BQ8IUX1 230 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 NUDCD3Q8IVD9 361 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 CMASQ8NFW8 434 aaPredicted RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 OR5B17Q8NGF7 314 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 WFIKKN2Q8TEU8 576 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 C2CD4CQ8TF44 421 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ZFPM2Q8WW38 1151 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 HSPH1Q92598 858 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TMEM143Q96AN5 459 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 CMTM5Q96DZ9 223 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TSNARE1Q96NA8 513 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 GBP5Q96PP8 586 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 QKIQ96PU8 341 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 KCNK16Q96T55 309 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 CADM1Q9BY67 442 aaKnown RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 YIPF3Q9GZM5 350 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 CTDSP1Q9GZU7 261 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ASB7Q9H672 318 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 SUDS3Q9H7L9 328 aaPredicted RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 POPDC2Q9HBU9 364 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ETNK2Q9NVF9 386 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TMEM248Q9NWD8 314 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 HOXC10Q9NYD6 342 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 NDUFA13Q9P0J0 144 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 SLC25A10Q9UBX3 287 aaPredicted RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ADAM28Q9UKQ2 775 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TNFSF13BQ9Y275 285 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 FRMPD3Q5JV73 1810 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TANC1Q9C0D5 1861 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 PTPRDP23468 1912 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 A0A1W2PPM1 405 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 FAM159BA6NKW6 160 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 AP3B1O00203 1094 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 PEX12O00623 359 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 SNNO75324 88 aaPredicted RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ENTPD5O75356 428 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 KRT36O76013 467 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 MLYCDO95822 493 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 TRUB2O95900 331 aaKnown RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 SCGB1D1O95968 90 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 DNTTP04053 509 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 WNT1P04628 370 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 SERPINE1P05121 402 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 KRT19P08727 400 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ACAA1P09110 424 aaPredicted RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ETS1P14921 441 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 GLULP15104 373 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 PGAM1P18669 254 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 CRABP2P29373 138 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 CHRNA5P30532 468 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 RFC1P35251 1148 aaPredicted RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 HNF1BP35680 557 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 TCF7P36402 384 aaPredicted RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 MAGEA3P43357 314 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ACADSBP45954 432 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 KPNA2P52292 529 aaKnown RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 GAS1P54826 345 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ACTR3P61158 418 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ARHGAP8P85298 464 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ASPHQ12797 758 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 OVGP1Q12889 678 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 TMEM132DQ14C87 1099 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 GPR68Q15743 365 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 CHI3L2Q15782 390 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 CCDC153Q494R4 210 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 GXYLT1Q4G148 440 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ACSBG2Q5FVE4 666 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 CFAP157Q5JU67 520 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 SH2D4BQ5SQS7 431 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 FNBP1LQ5T0N5 605 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 RARS2Q5T160 578 aaKnown RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 MFSD4BQ5TF39 518 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 VWA5B1Q5TIE3 1220 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 STEAP4Q687X5 459 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 NADSYN1Q6IA69 706 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 TIFABQ6ZNK6 161 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 CYS1Q717R9 158 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 PLPPR4Q7Z2D5 763 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 DHDDSQ86SQ9 333 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 PRPF39Q86UA1 669 aaKnown RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 PSTKQ8IV42 348 aaKnown RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ARID3BQ8IVW6 561 aaPredicted RBP4.91□□□□□ -1.62
LINC00458-202ENST00000427299 DDIASQ8IXT1 998 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 RNF149Q8NC42 400 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 RFWD2Q8NHY2 731 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 SEPT1Q8WYJ6 367 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 KCNJ9Q92806 393 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 SH3KBP1Q96B97 665 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ZNF560Q96MR9 790 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 RILPQ96NA2 401 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 PPP1R2P1Q96PQ5 205 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 RNF157Q96PX1 679 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 SERPINI1Q99574 410 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 ABHD14AQ9BUJ0 271 aa4.91□□□□□ -1.62
LINC00458-202ENST00000427299 TRIM2Q9C040 744 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms