RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TSNQ15631 228 aaKnown RBP17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 C18orf21Q32NC0 220 aaPredicted RBP17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 VWA5B1Q5TIE3 1220 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 Q8NA96 180 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 MFSD9Q8NBP5 474 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 KCT2Q8NC54 265 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 ZNF740Q8NDX6 193 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 OR9A4Q8NGU2 314 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 ATL1Q8WXF7 558 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 NEIL2Q969S2 332 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 MIB2Q96AX9 1013 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 MOCOSQ96EN8 888 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 GPR22Q99680 433 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 RBBP8Q99708 897 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 CPNE1Q99829 537 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 MFRPQ9BY79 579 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 UNKQ9C0B0 810 aaKnown RBP17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 SPNS1Q9H2V7 528 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 GPAMQ9HCL2 828 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 ZDHHC18Q9NUE0 388 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 C3orf18Q9UK00 162 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 PLAAQ9Y263 795 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 OARD1Q9Y530 152 aa17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 UBR5O95071 2799 aaPredicted RBP17.4■□□□□ 0.38
SMARCAL1-205ENST00000425815 CCDC88CQ9P219 2028 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 CTAGE15A4D2H0 777 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 SORBS2O94875 1100 aaKnown RBP17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 CCR8P51685 355 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 CDKL1Q00532 357 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 AIMP2Q13155 320 aaKnown RBP17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 USP10Q14694 798 aaKnown RBP17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 RBBP7Q16576 425 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 KBTBD12Q3ZCT8 623 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 JMJD6Q6NYC1 403 aaPredicted RBP17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 ASPGQ86U10 573 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 CTAGE6Q86UF2 777 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 THOC6Q86W42 341 aaKnown RBP17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 ZC3H7AQ8IWR0 971 aaKnown RBP17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 AMER2Q8N7J2 671 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 SLC13A3Q8WWT9 602 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 CDKL2Q92772 493 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 C8orf44Q96CB5 159 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 YIPF2Q9BWQ6 316 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 DERL2Q9GZP9 239 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 C5AR2Q9P296 337 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 SLC22A14Q9Y267 594 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 MAP4K5Q9Y4K4 846 aa17.39■□□□□ 0.37
SMARCAL1-205ENST00000425815 IDSB3KWA1 339 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 PHGDHO43175 533 aaKnown RBP17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 DPM1O60762 260 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 JRKO75564 520 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 GMPRP36959 345 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 GP5P40197 560 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 EMP2P54851 167 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 CKAP4Q07065 602 aaKnown RBP17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 ILF2Q12905 390 aaKnown RBP17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 ZKSCAN8Q15776 578 aaPredicted RBP17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 NDUFA9Q16795 377 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 IGFL3Q6UXB1 125 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 CCDC25Q86WR0 208 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 PDSS2Q86YH6 399 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 PARP9Q8IXQ6 854 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 CAMKVQ8NCB2 501 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 FBF1Q8TES7 1133 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 SLC5A11Q8WWX8 675 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 RHBDF1Q96CC6 855 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 MKKSQ9NPJ1 570 aaPredicted RBP17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 CTNNAL1Q9UBT7 734 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 PCM1Q15154 2024 aa17.38■□□□□ 0.37
SMARCAL1-205ENST00000425815 TNRC6AQ8NDV7 1962 aaKnown RBP17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 H0YIG0 161 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 SGK494L7N484 410 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 PRPF4O43172 522 aaKnown RBP eCLIP17.37■□□□□ 0.372e-7■■■■□ 25.6
SMARCAL1-205ENST00000425815 OR1F1O43749 312 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 DNAJB6O75190 326 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 BMP10O95393 424 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 NSA2O95478 260 aaKnown RBP17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 ANXA5P08758 320 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 CCDC166P0CW27 439 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 CD1DP15813 335 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 IL1RNP18510 177 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 GDF5P43026 501 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 KCNC1P48547 511 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 EFTUD2Q15029 972 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 WHAMMP3Q1A5X7 153 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 TUBB8Q3ZCM7 444 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 PLEKHN1Q494U1 663 aaPredicted RBP17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 UBAP2Q5T6F2 1119 aaKnown RBP17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 GRTP1Q5TC63 336 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 SLC6A19Q695T7 634 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 HPS6Q86YV9 775 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 KLHDC8AQ8IYD2 350 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 MMGT1Q8N4V1 131 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 AFAP1L2Q8N4X5 818 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 PPM1NQ8N819 430 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 UBXN10Q96LJ8 280 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 TSNARE1Q96NA8 513 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 C14orf105Q9NVL8 296 aa17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 G3BP2Q9UN86 482 aaKnown RBP17.37■□□□□ 0.37
SMARCAL1-205ENST00000425815 HEATR5BQ9P2D3 2071 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms