RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CETN2P41208 172 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 RWDD2BP57060 319 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 GBX1Q14549 363 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 MAPKAPK3Q16644 382 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 ICE2Q659A1 982 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 CEP128Q6ZU80 1094 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 LRRC6Q86X45 466 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 SHISA5Q8N114 240 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 TAB3Q8N5C8 712 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 PLPP5Q8NEB5 264 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 OR9A4Q8NGU2 314 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 OR51Q1Q8NH59 317 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 SLC24A3Q9HC58 644 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 CATSPERZQ9NTU4 200 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 MARCH4Q9P2E8 410 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 RNF6Q9Y252 685 aa15.75■□□□□ 0.11
CHCHD3-202ENST00000423635 OR2W5A6NFC9 320 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 MYO1CO00159 1063 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 CD3EAPO15446 510 aaKnown RBP15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 SLC25A12O75746 678 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 CCNDBP1O95273 360 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 KLK2P20151 261 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 ATP5DP30049 168 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 PTGER1P34995 402 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 HSD17B2P37059 387 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 ABATP80404 500 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 MFSD4BQ5TF39 518 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 ZNF468Q5VIY5 522 aaPredicted RBP15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 TMEM200AQ86VY9 491 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 VSTM4Q8IW00 320 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 CPSF7Q8N684 471 aaKnown RBP15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 POGLUT1Q8NBL1 392 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 MCOLN3Q8TDD5 553 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 NRGNQ92686 78 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 UCK2Q9BZX2 261 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 CDCP1Q9H5V8 836 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 KCNJ16Q9NPI9 418 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 TAC3Q9UHF0 121 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 PCYOX1Q9UHG3 505 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 TFR2Q9UP52 801 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 TCAF1Q9Y4C2 921 aa15.74■□□□□ 0.11
CHCHD3-202ENST00000423635 A0A1B0GTH9 108 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 SYCE3A1L190 88 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 NKX2-6A6NCS4 301 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 ARHGEF33A8MVX0 844 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 BCL6P41182 706 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 GRIA1P42261 906 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 XCR1P46094 333 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 TAS2R50P59544 299 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 FOLH1Q04609 750 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 PAPD4Q6PIY7 484 aaKnown RBP15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 RPS19BP1Q86WX3 136 aaKnown RBP15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 ZNF227Q86WZ6 799 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 MPP5Q8N3R9 675 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 SLC35B2Q8TB61 432 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 ELP5Q8TE02 316 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 ALG3Q92685 438 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 CALR3Q96L12 384 aaKnown RBP15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 LPAR4Q99677 370 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 PCDHA13Q9Y5I0 950 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 ABCA4P78363 2273 aa15.73■□□□□ 0.11
CHCHD3-202ENST00000423635 VPS13CQ709C8 3753 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 KCNE1BA0A087WTH5 132 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 HAT1O14929 419 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 CBFA2T2O43439 604 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 PSIP1O75475 530 aaKnown RBP15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 TPOP07202 933 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 FOSL1P15407 271 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 PNLIPRP1P54315 467 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 PPP2R2AP63151 447 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 ACTN3Q08043 901 aaPredicted RBP15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 USP10Q14694 798 aaKnown RBP15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 SFT2D3Q587I9 215 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 PRSS41Q7RTY9 318 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 CD163Q86VB7 1156 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 C16orf52Q8NHV5 167 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 RND1Q92730 232 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 BIRC8Q96P09 236 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 PKP4Q99569 1192 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 EBNA1BP2Q99848 306 aaKnown RBP15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 ETNK1Q9HBU6 452 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 DLL4Q9NR61 685 aa15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 CCM2LQ9NUG4 571 aaPredicted RBP15.72■□□□□ 0.11
CHCHD3-202ENST00000423635 GOLGA6L9A6NEM1 432 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 ZNF839A8K0R7 811 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 E7ENX8 843 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 NDC80O14777 642 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 NDUFS3O75489 264 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 IL10P22301 178 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 TRHRP34981 398 aaPredicted RBP15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 CYB561P49447 251 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 SLC26A5P58743 744 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 RHAGQ02094 409 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 TAP2Q03519 686 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 KLF1Q13351 362 aaPredicted RBP15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 NSDHLQ15738 373 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 CTSL3PQ5NE16 218 aa15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 TMEM214Q6NUQ4 689 aaKnown RBP15.71■□□□□ 0.11
CHCHD3-202ENST00000423635 PPP1R21Q6ZMI0 780 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms