RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ANKRD22Q5VYY1 191 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 PLAG1Q6DJT9 500 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 MRNIPQ6NTE8 343 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 H3F3CQ6NXT2 135 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 XKRXQ6PP77 449 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 MBOAT1Q6ZNC8 495 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 PIWIL4Q7Z3Z4 852 aaKnown RBP7.64□□□□□ -1.19
VIM-202ENST00000421459 FGD2Q7Z6J4 655 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 SPPL2CQ8IUH8 684 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 DENND6AQ8IWF6 608 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 CHERPQ8IWX8 916 aaKnown RBP7.64□□□□□ -1.19
VIM-202ENST00000421459 KIF2BQ8N4N8 673 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 PRELID2Q8N945 189 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 MDS2Q8NDY4 140 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 OR5T3Q8NGG3 340 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 METTL21AQ8WXB1 218 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 TSLPQ969D9 159 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 ALKBH8Q96BT7 664 aaKnown RBP7.64□□□□□ -1.19
VIM-202ENST00000421459 MTFMTQ96DP5 389 aaKnown RBP7.64□□□□□ -1.19
VIM-202ENST00000421459 MVB12AQ96EY5 273 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 MRFAP1L1Q96HT8 127 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 GPR137Q96N19 417 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 IL22Q9GZX6 179 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 RNF32Q9H0A6 362 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 CDCP1Q9H5V8 836 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 CHST11Q9NPF2 352 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 BFARQ9NZS9 450 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 ADAMTS6Q9UKP5 1117 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 ZNF835Q9Y2P0 537 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 ANKRD12Q6UB98 2062 aa7.64□□□□□ -1.19
VIM-202ENST00000421459 GABRR3A8MPY1 467 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 E5RI56 91 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 ADAM10O14672 748 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 TTI1O43156 1089 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 ASNA1O43681 348 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 CLDN14O95500 239 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 ESR1P03372 595 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 ATP5DP30049 168 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 RFC3P40938 356 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 BCL6P41182 706 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 VPS41P49754 854 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 PGGT1BP53609 377 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 RIPPLY3P57055 190 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 CSNK1G2P78368 415 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 OLR1P78380 273 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 MEF2AQ02078 507 aaPredicted RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 ALDH6A1Q02252 535 aaKnown RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 OC90Q02509 493 aaPredicted RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 FAM53BQ14153 422 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 ARHGAP19Q14CB8 494 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 CCNG2Q16589 344 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 LONRF1Q17RB8 773 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 SFT2D3Q587I9 215 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 TMEM214Q6NUQ4 689 aaKnown RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 NEPROQ6NW34 567 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 PAPD4Q6PIY7 484 aaKnown RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 RPTNQ6XPR3 784 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 Q6ZPB1 254 aaPredicted RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 UBE2R2Q712K3 238 aaPredicted RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 GSTA5Q7RTV2 222 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 GALNTL5Q7Z4T8 443 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 SLC26A11Q86WA9 606 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 DOLPP1Q86YN1 238 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 CILP2Q8IUL8 1156 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 SIAH3Q8IW03 269 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 CPNE9Q8IYJ1 553 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 SPC24Q8NBT2 197 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 AGAP11Q8TF27 550 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 ASB11Q8WXH4 323 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 SCMH1Q96GD3 660 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 PEX11GQ96HA9 241 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 MAGED4Q96JG8 741 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 ZNF354BQ96LW1 612 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 FRMD6Q96NE9 622 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 UTP23Q9BRU9 249 aaKnown RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 FRMD8P1Q9BZ68 369 aaPredicted RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 EIF2B3Q9NR50 452 aaKnown RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 GUCA1BQ9UMX6 200 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 SOX13Q9UN79 622 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 DRG1Q9Y295 367 aaKnown RBP7.63□□□□□ -1.19
VIM-202ENST00000421459 MEMO1Q9Y316 297 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 NEU2Q9Y3R4 380 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 HRH3Q9Y5N1 445 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 MRFAP1Q9Y605 127 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 NF1P21359 2839 aa7.63□□□□□ -1.19
VIM-202ENST00000421459 HIVEP1P15822 2718 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 DIDO1Q9BTC0 2240 aaKnown RBP7.62□□□□□ -1.19
VIM-202ENST00000421459 CTAGE15A4D2H0 777 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 CTAGE9A4FU28 777 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 A8MUA0 341 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 H0YIG0 161 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 H3BMM5 538 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 GOLGA8MH3BSY2 632 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 GFYI3L273 518 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 DIAPH2O60879 1101 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 PHF2O75151 1096 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 NEURL1O76050 574 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 HAUS5O94927 633 aa7.62□□□□□ -1.19
VIM-202ENST00000421459 CCNDBP1O95273 360 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms