RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 LINGO1Q96FE5 620 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 PWWP2AQ96N64 755 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 MESP1Q9BRJ9 268 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 PLAC1Q9HBJ0 212 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 RIC8BQ9NVN3 520 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 ADAMTS6Q9UKP5 1117 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 DOCK10Q96BY6 2186 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 POLEQ07864 2286 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 LOC102723996A0A087X1L8 192 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 IGHV1-45A0A0A0MS14 117 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 PABPN1LA6NDY0 278 aaKnown RBP24.02■■□□□ 1.44
VEGFA-208ENST00000417285 P2RX6O15547 441 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 KLHL18O94889 574 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 CYC1P08574 325 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 PRR35P0CG20 571 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 IL2P60568 153 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 TBPL1P62380 186 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 CDC16Q13042 620 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 FRG1Q14331 258 aaKnown RBP24.02■■□□□ 1.44
VEGFA-208ENST00000417285 C4orf17Q53FE4 359 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 LINC00696Q6ZRV3 163 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 C17orf64Q86WR6 236 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 GPATCH11Q8N954 259 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 CNDP1Q96KN2 507 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 TRIM54Q9BYV2 358 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 TRIM31Q9BZY9 425 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 SLC17A6Q9P2U8 582 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 MKL2Q9ULH7 1088 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 CSAG2Q9Y5P2 127 aa24.02■■□□□ 1.44
VEGFA-208ENST00000417285 WIPF3A6NGB9 483 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 EFCAB8A8MWE9 144 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 BMP10O95393 424 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 NSA2O95478 260 aaKnown RBP24.01■■□□□ 1.43
VEGFA-208ENST00000417285 GRK3P35626 688 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 CSNK1G2P78368 415 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 HECTD2Q5U5R9 776 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 FAM45BPQ6NSW5 357 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 RPUSD3Q6P087 351 aaKnown RBP24.01■■□□□ 1.43
VEGFA-208ENST00000417285 TRMT10BQ6PF06 316 aaKnown RBP24.01■■□□□ 1.43
VEGFA-208ENST00000417285 TMEM205Q6UW68 189 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 CAMKVQ8NCB2 501 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 ST6GALNAC3Q8NDV1 305 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 FAM45AQ8TCE6 357 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 METTL21AQ8WXB1 218 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 KRT12Q99456 494 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 WDR83Q9BRX9 315 aaKnown RBP24.01■■□□□ 1.43
VEGFA-208ENST00000417285 HAUS8Q9BT25 410 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 SGPP1Q9BX95 441 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 ZNF700Q9H0M5 742 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 SLC5A6Q9Y289 635 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 NTNG1Q9Y2I2 539 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 VWA7Q9Y334 891 aa24.01■■□□□ 1.43
VEGFA-208ENST00000417285 DYTNA2CJ06 578 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 FFAR3O14843 346 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 GPR42O15529 346 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 WFS1O76024 890 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 NAE1Q13564 534 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 CAPN13Q6MZZ7 669 aaPredicted RBP24■■□□□ 1.43
VEGFA-208ENST00000417285 LCTLQ6UWM7 567 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 VN1R4Q7Z5H5 301 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 ANKMY2Q8IV38 441 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 ZC3H7AQ8IWR0 971 aaKnown RBP24■■□□□ 1.43
VEGFA-208ENST00000417285 PSMF1Q92530 271 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 HAS2Q92819 552 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 TM4SF19Q96DZ7 209 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 ATG10Q9H0Y0 220 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 ZFATQ9P243 1243 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 NUP210LQ5VU65 1888 aa24■■□□□ 1.43
VEGFA-208ENST00000417285 NPPBP16860 134 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 SOX11P35716 441 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 AP1S2P56377 157 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 ARG2P78540 354 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 PDIA2Q13087 525 aaKnown RBP23.99■■□□□ 1.43
VEGFA-208ENST00000417285 DUPD1Q68J44 220 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 FAAH2Q6GMR7 532 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 TMEM214Q6NUQ4 689 aaKnown RBP23.99■■□□□ 1.43
VEGFA-208ENST00000417285 BBOF1Q8ND07 529 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 OR9A4Q8NGU2 314 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 FAR1Q8WVX9 515 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 TUBB6Q9BUF5 446 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 PTGFRNQ9P2B2 879 aa23.99■■□□□ 1.43
VEGFA-208ENST00000417285 C8orf89P0DMQ9 161 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 EEF1A2Q05639 463 aaKnown RBP23.98■■□□□ 1.43
VEGFA-208ENST00000417285 MGAT5Q09328 741 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 SYT16Q17RD7 645 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 MBOAT1Q6ZNC8 495 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 FBXO36Q8NEA4 188 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 OR1N1Q8NGS0 311 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 BRIX1Q8TDN6 353 aaKnown RBP23.98■■□□□ 1.43
VEGFA-208ENST00000417285 GRHL3Q8TE85 626 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 SLC13A3Q8WWT9 602 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 ATL1Q8WXF7 558 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 ALKBH8Q96BT7 664 aaKnown RBP23.98■■□□□ 1.43
VEGFA-208ENST00000417285 C5orf34Q96MH7 638 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 CYTH2Q99418 400 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 ARL15Q9NXU5 204 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 SNX24Q9Y343 169 aa23.98■■□□□ 1.43
VEGFA-208ENST00000417285 MRPS2Q9Y399 296 aaKnown RBP23.98■■□□□ 1.43
VEGFA-208ENST00000417285 TSPAN12O95859 305 aa23.97■■□□□ 1.43
VEGFA-208ENST00000417285 MYBL2P10244 700 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms