RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ADH1CP00326 375 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 ZNF20P17024 532 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 NPR2P20594 1047 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 ARSFP54793 590 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 DIO3P55073 304 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 ARFRP1Q13795 201 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 PCBP1Q15365 356 aaKnown RBP eCLIP11.71□□□□□ -0.53
UBR4-205ENST00000417040 CHRNA6Q15825 494 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 CCDC58Q4VC31 144 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 RNF130Q86XS8 419 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 TIGD4Q8IY51 512 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 C9orf43Q8TAL5 461 aaPredicted RBP11.71□□□□□ -0.53
UBR4-205ENST00000417040 LCN9Q8WX39 176 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 MAGEH1Q9H213 219 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 SMURF1Q9HCE7 757 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 PNO1Q9NRX1 252 aaKnown RBP11.71□□□□□ -0.53
UBR4-205ENST00000417040 GDAP2Q9NXN4 497 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 COLEC10Q9Y6Z7 277 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 GRXCR1A8MXD5 290 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 GATBO75879 557 aaKnown RBP11.71□□□□□ -0.53
UBR4-205ENST00000417040 RENP00797 406 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 SULT2A1Q06520 285 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 PMS2P3Q13401 168 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 DENND6BQ8NEG7 585 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 NCSTNQ92542 709 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 S100PBPQ96BU1 408 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 ZNF700Q9H0M5 742 aa11.71□□□□□ -0.53
UBR4-205ENST00000417040 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.71□□□□□ -0.54
UBR4-205ENST00000417040 METTL21EPA6NDL7 271 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 IL7P13232 177 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 PRPS1L1P21108 318 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 IGFBP4P22692 258 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 SMSP52788 366 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 HNRNPDQ14103 355 aaKnown RBP11.71□□□□□ -0.54
UBR4-205ENST00000417040 XKRXQ6PP77 449 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 LRRN1Q6UXK5 716 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 CCDC107Q8WV48 283 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 RBM18Q96H35 190 aaKnown RBP11.71□□□□□ -0.54
UBR4-205ENST00000417040 UBQLN2Q9UHD9 624 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 A0A1W2PP18 115 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 CD8B2A6NJW9 211 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 GPR89AB7ZAQ6 455 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 B3GALT2O43825 422 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 GPR89BP0CG08 455 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 CD8BP10966 210 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 VAMP2P63027 116 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 SLC25A25Q6KCM7 469 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 JAGN1Q8N5M9 183 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 FNDC8Q8TC99 324 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 LRRC15Q8TF66 581 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 ASPNQ9BXN1 380 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 P2RX2Q9UBL9 471 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 MEMO1Q9Y316 297 aa11.71□□□□□ -0.54
UBR4-205ENST00000417040 A0A0J9YVX5 310 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 KLF11O14901 512 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 PLD2O14939 933 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 KMOO15229 486 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 PCDHGA12O60330 932 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 CYBRD1Q53TN4 286 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 CDKL4Q5MAI5 379 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 TPT1P8Q9HAU6 139 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 ZCCHC3Q9NUD5 404 aaKnown RBP11.7□□□□□ -0.54
UBR4-205ENST00000417040 EXTL2Q9UBQ6 330 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 CPQQ9Y646 472 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 A0A1B0GVM2 712 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 ZNF705EA8MWA4 302 aaPredicted RBP11.7□□□□□ -0.54
UBR4-205ENST00000417040 RFPL1O75677 317 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 ADH1AP07327 375 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 CLCN2P51788 898 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 RPS13P62277 151 aaKnown RBP11.7□□□□□ -0.54
UBR4-205ENST00000417040 ARSIQ5FYB1 569 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 GTF2IRD2BQ6EKJ0 949 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 NANOGP8Q6NSW7 305 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 GTF2IRD2Q86UP8 949 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 THOC6Q86W42 341 aaKnown RBP11.7□□□□□ -0.54
UBR4-205ENST00000417040 GJD3Q8N144 294 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 TMEM151AQ8N4L1 468 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 CDKN2AIPNLQ96HQ2 116 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 ACBD6Q9BR61 282 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 NANOGQ9H9S0 305 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 PHPT1Q9NRX4 125 aaPredicted RBP11.7□□□□□ -0.54
UBR4-205ENST00000417040 CALML5Q9NZT1 146 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 COL1A2P08123 1366 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 INPPL1O15357 1258 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 RASAL1O95294 804 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 SLC35G6P0C7Q6 338 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 CLCN7P51798 805 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 MOGSQ13724 837 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 FBXO43Q4G163 708 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 CDHR3Q6ZTQ4 885 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 OR2L8Q8NGY9 312 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 NDNFQ8TB73 568 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 GTPBP2Q9BX10 602 aaKnown RBP11.7□□□□□ -0.54
UBR4-205ENST00000417040 C14orf105Q9NVL8 296 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 NDUFS4O43181 175 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 CLDN7O95471 211 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 PAX3P23760 479 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 YBEYP58557 167 aaPredicted RBP11.7□□□□□ -0.54
UBR4-205ENST00000417040 CDK6Q00534 326 aa11.7□□□□□ -0.54
UBR4-205ENST00000417040 MEF2AQ02078 507 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms