RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 OR4K1Q8NGD4 311 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 OR9Q2Q8NGE9 314 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 METTL21AQ8WXB1 218 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 SLCO4A1Q96BD0 722 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 ELSPBP1Q96BH3 223 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 FAM122AQ96E09 287 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 PGAM5Q96HS1 289 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 CMTM3Q96MX0 182 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 TBX15Q96SF7 602 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 CDCA3Q99618 268 aaPredicted RBP0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 OLFM1Q99784 485 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 PAXXQ9BUH6 204 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 PREBQ9HCU5 417 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 HACD3Q9P035 362 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 KLK11Q9UBX7 282 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 SPATA2Q9UM82 520 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 MRPL11Q9Y3B7 192 aaKnown RBP0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 SPATA31D1Q6ZQQ2 1576 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 LNP1A1A4G5 178 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 ZSCAN5CA6NGD5 496 aaPredicted RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 EPOPA6NHQ4 379 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 LRRC72A6NJI9 287 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 MEIS2O14770 477 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 TNFSF12O43508 249 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 ZNF861PO60384 105 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 DFNA5O60443 496 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 CYTIPO60759 359 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 MITFO75030 526 aaPredicted RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 ZWINTO95229 277 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 BAG3O95817 575 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 HCKP08631 526 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 PSMA4P25789 261 aaKnown RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 MDH2P40926 338 aaKnown RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 CASP6P55212 293 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 OR1D5P58170 312 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 CXCL9Q07325 125 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 KIAA0040Q15053 153 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 DUSP5Q16690 384 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 POM121L1PQ3SYA9 428 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 RNASEH2BQ5TBB1 312 aaKnown RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 HEATR4Q86WZ0 1026 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 CEP57Q86XR8 500 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 RNF175Q8N4F7 328 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 PDILTQ8N807 584 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 SIPA1Q96FS4 1042 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 FAM71F1Q96KD3 344 aaPredicted RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 RUNDC3BQ96NL0 473 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 MXD3Q9BW11 206 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 PATZ1Q9HBE1 687 aaKnown RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 RRN3Q9NYV6 651 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 PKD2L2Q9NZM6 624 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 ARMCX1Q9P291 453 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 ZNF282Q9UDV7 671 aaPredicted RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 CORO1CQ9ULV4 474 aaPredicted RBP0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 MOKQ9UQ07 419 aa0.72□□□□□ -2.29
GTF3C3-203ENST00000416690 FBN1P35555 2871 aaKnown RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 NEDD4P46934 1319 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 A0A087WZ39 114 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 hCG_38984A0A1B0GV85 526 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 MTMR11A4FU01 709 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 NEMP2A6NFY4 417 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 MYO1GB0I1T2 1018 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 RTCAO00442 366 aaKnown RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 PDXKO00764 312 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 DDX58O95786 925 aaKnown RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 ACTL6AO96019 429 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 IGHG1P01857 330 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 HSPA1AP0DMV8 641 aaKnown RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 HSPA1BP0DMV9 641 aaKnown RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 IRF2P14316 349 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 CPN1P15169 458 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 CD1DP15813 335 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 RPS2P15880 293 aaKnown RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 C4BPBP20851 252 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 CD27P26842 260 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 CCR9P51686 369 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 ZNF33BQ06732 778 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 OPCMLQ14982 345 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 KNOP1Q1ED39 458 aaKnown RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 MCMDC2Q4G0Z9 681 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 VWA2Q5GFL6 755 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 IL17RELQ6ZVW7 336 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 MCM10Q7L590 875 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 NUP54Q7Z3B4 507 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 CPLX4Q7Z7G2 160 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 AACSQ86V21 672 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 TMEM173Q86WV6 379 aaPredicted RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 RCOR2Q8IZ40 523 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 LYPD1Q8N2G4 141 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 SYN2Q92777 582 aaPredicted RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 MCCC1Q96RQ3 725 aaPredicted RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 ZNF184Q99676 751 aaPredicted RBP0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 PI4K2AQ9BTU6 479 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 HRH4Q9H3N8 390 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 Q9H8V8 135 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 WDR41Q9HAD4 459 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 DEPPQ9NTK1 212 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 TBC1D13Q9NVG8 400 aa0.71□□□□□ -2.3
GTF3C3-203ENST00000416690 DPP3Q9NY33 737 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms