RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TRIM31Q9BZY9 425 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 LHPPQ9H008 270 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 PARVBQ9HBI1 364 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 LOC102723996A0A087X1L8 192 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 OR2W5A6NFC9 320 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 PIAS1O75925 651 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 AGFG2O95081 481 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 CBX6O95503 412 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 SOX11P35716 441 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 RPL21P46778 160 aaKnown RBP14.31□□□□□ -0.12
UBXN4-203ENST00000416538 RGS4P49798 205 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 EMP2P54851 167 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 MEF2AQ02078 507 aaPredicted RBP14.31□□□□□ -0.12
UBXN4-203ENST00000416538 FAM53BQ14153 422 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 ZNF460Q14592 562 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 AGAP7PQ5VUJ5 663 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 LRRC8EQ6NSJ5 796 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 TMEM214Q6NUQ4 689 aaKnown RBP14.31□□□□□ -0.12
UBXN4-203ENST00000416538 LCTLQ6UWM7 567 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 LINC00696Q6ZRV3 163 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 LANCL3Q6ZV70 420 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 PCGF5Q86SE9 256 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 MYO1HQ8N1T3 1032 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 ZADH2Q8N4Q0 377 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 KCT2Q8NC54 265 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 MCOLN3Q8TDD5 553 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 ALKBH8Q96BT7 664 aaKnown RBP14.31□□□□□ -0.12
UBXN4-203ENST00000416538 MOCOSQ96EN8 888 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 AGAP4Q96P64 663 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 NAPGQ99747 312 aaPredicted RBP14.31□□□□□ -0.12
UBXN4-203ENST00000416538 TGIF2Q9GZN2 237 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 MKKSQ9NPJ1 570 aaPredicted RBP14.31□□□□□ -0.12
UBXN4-203ENST00000416538 SMYD2Q9NRG4 433 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 TMEM184CQ9NVA4 438 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 C14orf105Q9NVL8 296 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 HCN3Q9P1Z3 774 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 CDC14AQ9UNH5 594 aa14.31□□□□□ -0.12
UBXN4-203ENST00000416538 KCNE1BA0A087WTH5 132 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 E7ESA3 106 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 SLC16A5O15375 505 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 BMP10O95393 424 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 PRR35P0CG20 571 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 GP1BBP13224 206 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 NPPBP16860 134 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 ZNF37AP17032 561 aaPredicted RBP14.3□□□□□ -0.12
UBXN4-203ENST00000416538 RPS15AP62244 130 aaKnown RBP14.3□□□□□ -0.12
UBXN4-203ENST00000416538 PPP1R3AQ16821 1122 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 FHL5Q5TD97 284 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 UGT3A1Q6NUS8 523 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 TMEM205Q6UW68 189 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 SYDE1Q6ZW31 735 aaPredicted RBP14.3□□□□□ -0.12
UBXN4-203ENST00000416538 C17orf64Q86WR6 236 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 PDIK1LQ8N165 341 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 CATSPER1Q8NEC5 780 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 OR56A3Q8NH54 315 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 BRIX1Q8TDN6 353 aaKnown RBP14.3□□□□□ -0.12
UBXN4-203ENST00000416538 TM9SF4Q92544 642 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 TM4SF19Q96DZ7 209 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 SNF8Q96H20 258 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 CNDP1Q96KN2 507 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 MCMBPQ9BTE3 642 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 YIPF2Q9BWQ6 316 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 VN1R1Q9GZP7 353 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 PPANQ9NQ55 473 aaKnown RBP14.3□□□□□ -0.12
UBXN4-203ENST00000416538 RYDENQ9NUL5 291 aaKnown RBP14.3□□□□□ -0.12
UBXN4-203ENST00000416538 UTP6Q9NYH9 597 aaKnown RBP14.3□□□□□ -0.12
UBXN4-203ENST00000416538 ERRFI1Q9UJM3 462 aaPredicted RBP14.3□□□□□ -0.12
UBXN4-203ENST00000416538 SAR1BQ9Y6B6 198 aa14.3□□□□□ -0.12
UBXN4-203ENST00000416538 UNC79Q9P2D8 2635 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 NSG1A0A0A6YYJ2 146 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 IGHV3-20A0A0C4DH32 117 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 ZNF860A6NHJ4 632 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 SGK494L7N484 410 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 PRPF4O43172 522 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBXN4-203ENST00000416538 NSA2O95478 260 aaKnown RBP14.29□□□□□ -0.12
UBXN4-203ENST00000416538 B3GALT4O96024 378 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 ANXA5P08758 320 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 ITGAMP11215 1152 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 TSFMP43897 325 aaKnown RBP14.29□□□□□ -0.12
UBXN4-203ENST00000416538 PDIA2Q13087 525 aaKnown RBP14.29□□□□□ -0.12
UBXN4-203ENST00000416538 MFAP5Q13361 173 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 CATSPEREQ5SY80 951 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 B3GNTL1Q67FW5 361 aaPredicted RBP14.29□□□□□ -0.12
UBXN4-203ENST00000416538 FAM45BPQ6NSW5 357 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 ISLR2Q6UXK2 745 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 NDUFAF7Q7L592 441 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 SLC26A11Q86WA9 606 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 ZC3HC1Q86WB0 502 aaKnown RBP14.29□□□□□ -0.12
UBXN4-203ENST00000416538 SIRT6Q8N6T7 355 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 ZNF740Q8NDX6 193 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 FBXO36Q8NEA4 188 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 ABHD11Q8NFV4 315 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 FAM45AQ8TCE6 357 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 RBCK1Q9BYM8 510 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 SLC29A3Q9BZD2 475 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 MKL2Q9ULH7 1088 aa14.29□□□□□ -0.12
UBXN4-203ENST00000416538 NPEPPSL1A6NEC2 478 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 C4orf51C9J302 202 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 H0YIG0 161 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 CDC7O00311 574 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms