RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 LYSMD4Q5XG99 296 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 ACSM2BQ68CK6 577 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 KLHL35Q6PF15 583 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 PAQR7Q86WK9 346 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 TRIM48Q8IWZ4 208 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 CARFQ8N187 725 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 DEFB119Q8N690 84 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 ANKRD53Q8N9V6 530 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 ZBTB44Q8NCP5 570 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 ZNF740Q8NDX6 193 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 FBXO27Q8NI29 283 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 CREB3L4Q8TEY5 395 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 TM4SF19Q96DZ7 209 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 MTERF3Q96E29 417 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 APIPQ96GX9 242 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 ZNF764Q96H86 408 aaPredicted RBP12.8□□□□□ -0.36
ZNF3-206ENST00000415068 TEX37Q96LM6 180 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 MTERF1Q99551 399 aaKnown RBP12.8□□□□□ -0.36
ZNF3-206ENST00000415068 GPATCH1Q9BRR8 931 aaKnown RBP12.8□□□□□ -0.36
ZNF3-206ENST00000415068 MS4A8Q9BY19 250 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 EPB41L1Q9H4G0 881 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 XKR8Q9H6D3 395 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 SPHK1Q9NYA1 384 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 GIMAP2Q9UG22 337 aa12.8□□□□□ -0.36
ZNF3-206ENST00000415068 G3BP2Q9UN86 482 aaKnown RBP12.8□□□□□ -0.36
ZNF3-206ENST00000415068 PRAMEF33A0A0G2JMD5 474 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 C2orf74A8MZ97 194 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 SCAMP1O15126 338 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 YKT6O15498 198 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 LCMT2O60294 686 aaKnown RBP12.79□□□□□ -0.36
ZNF3-206ENST00000415068 NOBOXO60393 691 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 GRIA3P42263 894 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 EPHA4P54764 986 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 MTTPP55157 894 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 KCNK10P57789 538 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 RAE1P78406 368 aaKnown RBP12.79□□□□□ -0.36
ZNF3-206ENST00000415068 ELF3P78545 371 aaPredicted RBP12.79□□□□□ -0.36
ZNF3-206ENST00000415068 CSTF1Q05048 431 aaKnown RBP12.79□□□□□ -0.36
ZNF3-206ENST00000415068 LRRC74AQ0VAA2 488 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 SQSTM1Q13501 440 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 ART3Q13508 389 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 PWP1Q13610 501 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 NR1D2Q14995 579 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 ZNF542PQ5EBM4 170 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 KHDRBS2Q5VWX1 349 aaKnown RBP12.79□□□□□ -0.36
ZNF3-206ENST00000415068 PRMT9Q6P2P2 845 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 FBXO42Q6P3S6 717 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 SYT12Q8IV01 421 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 SCUBE1Q8IWY4 988 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 ARL14Q8N4G2 192 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 FBXL6Q8N531 539 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 NATD1Q8N6N6 113 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 MFSD9Q8NBP5 474 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 SRFBP1Q8NEF9 429 aaKnown RBP12.79□□□□□ -0.36
ZNF3-206ENST00000415068 OR8J2Q8NGG1 315 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 CEP76Q8TAP6 659 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 COQ8BQ96D53 544 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 MARK4Q96L34 752 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 QRFPRQ96P65 431 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 ZBTB18Q99592 522 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 DPH7Q9BTV6 452 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 DPY30Q9C005 99 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 MIR1-1HGQ9H1L0 117 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 SPNS1Q9H2V7 528 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 CUEDC1Q9NWM3 386 aaPredicted RBP12.79□□□□□ -0.36
ZNF3-206ENST00000415068 ZSCAN32Q9NX65 697 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 MCM8Q9UJA3 840 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 LEF1Q9UJU2 399 aaPredicted RBP12.79□□□□□ -0.36
ZNF3-206ENST00000415068 PILRAQ9UKJ1 303 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 DLGAP4Q9Y2H0 992 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 AP3M1Q9Y2T2 418 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 HEATR5BQ9P2D3 2071 aa12.79□□□□□ -0.36
ZNF3-206ENST00000415068 THADAQ6YHU6 1953 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 LRIT2A6NDA9 550 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 AIM2O14862 343 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 ETHE1O95571 254 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 ANXA6P08133 673 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 PCNAP12004 261 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 SDC1P18827 310 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 CAPN3P20807 821 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 RPL3P39023 403 aaKnown RBP12.78□□□□□ -0.36
ZNF3-206ENST00000415068 GPR3P46089 330 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 RPS15AP62244 130 aaKnown RBP12.78□□□□□ -0.36
ZNF3-206ENST00000415068 RPL38P63173 70 aaKnown RBP12.78□□□□□ -0.36
ZNF3-206ENST00000415068 SLC25A3Q00325 362 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 BNC1Q01954 994 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 HHEXQ03014 270 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 MMEL1Q495T6 779 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 KIAA1614Q5VZ46 1190 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 FAM219BQ5XKK7 198 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 GK5Q6ZS86 529 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 ARMCX6Q7L4S7 300 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 PAGE2Q7Z2X7 111 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 KANSL1Q7Z3B3 1105 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 ZNF438Q7Z4V0 828 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 C10orf67Q8IYJ2 551 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 FBXW8Q8N3Y1 598 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 SLC25A45Q8N413 288 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 LIX1Q8N485 282 aa12.78□□□□□ -0.36
ZNF3-206ENST00000415068 C2orf73Q8N5S3 287 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms