RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ATP6AP2O75787 350 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 CHRM5P08912 532 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-202ENST00000414700 CDH1P12830 882 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 EPHA3P29320 983 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 NUBP1P53384 320 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 IRF8Q02556 426 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 DCTN2Q13561 401 aaKnown RBP14.93□□□□□ -0.02
SHMT2-202ENST00000414700 C6orf132Q5T0Z8 1188 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 ADNP2Q6IQ32 1131 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 LCTLQ6UWM7 567 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 SLCO4C1Q6ZQN7 724 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 ZNF438Q7Z4V0 828 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 SLC35F3Q8IY50 421 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 RAB42Q8N4Z0 105 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 ZBTB8BQ8NAP8 495 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-202ENST00000414700 PRSS33Q8NF86 280 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 OR10G6Q8NH81 332 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 TWIST2Q8WVJ9 160 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 CCDC106Q9BWC9 280 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 RAB11FIP5Q9BXF6 653 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 OR6C2Q9NZP2 312 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 ZNF232Q9UNY5 417 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 CSNK1G3Q9Y6M4 447 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 ASCC3Q8N3C0 2202 aaKnown RBP14.93□□□□□ -0.02
SHMT2-202ENST00000414700 KCNE1BA0A087WTH5 132 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 A0A088AWK7 358 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 IGKV1-8A0A0C4DH67 115 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 OR6C74A6NCV1 312 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 TRIM38O00635 465 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 PIP5K1BO14986 540 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 CASC3O15234 703 aaKnown RBP14.93□□□□□ -0.02
SHMT2-202ENST00000414700 PGM3O95394 542 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 UROSP10746 265 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 CDK4P11802 303 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 HGFP14210 728 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 TYRP1P17643 537 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 ENGP17813 658 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 POLR2CP19387 275 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-202ENST00000414700 IDH3AP50213 366 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 PPP1CAP62136 330 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 C14orf28Q4W4Y0 310 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 LPCAT4Q643R3 524 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 EPGNQ6UW88 154 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 RABEPKQ7Z6M1 372 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 RNF175Q8N4F7 328 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 SLC5A11Q8WWX8 675 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 RSC1A1Q92681 617 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 OR52B2Q96RD2 323 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 KLHL20Q9Y2M5 609 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 DMXL1Q9Y485 3027 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 WDFY3Q8IZQ1 3526 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 ZNF839A8K0R7 811 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 HNRNPCP07910 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHMT2-202ENST00000414700 LINC00032P0C843 101 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 PEX2P28328 305 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 DPP6P42658 865 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 NEK2P51955 445 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 CBX3Q13185 183 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 ABRAXAS2Q15018 415 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 PLA2G2CQ5R387 149 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 L3MBTL4Q8NA19 623 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 ZNF740Q8NDX6 193 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 FLVCR1-AS1Q8TAF5 88 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 ZFPM2Q8WW38 1151 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 PYDC1Q8WXC3 89 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 MTFMTQ96DP5 389 aaKnown RBP14.92□□□□□ -0.02
SHMT2-202ENST00000414700 LOXL4Q96JB6 756 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 PPM1MQ96MI6 270 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 RBM38Q9H0Z9 239 aaKnown RBP14.92□□□□□ -0.02
SHMT2-202ENST00000414700 GIMAP2Q9UG22 337 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 RAB23Q9ULC3 237 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 DYRK1BQ9Y463 629 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 LNP1A1A4G5 178 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 ISM1B1AKI9 464 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 H7BY64 318 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 TXNDC9O14530 226 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 CASQ2O14958 399 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-202ENST00000414700 CLPTM1O96005 669 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 CPOXP36551 454 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 LRRC36Q1X8D7 754 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 SGO1Q5FBB7 561 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 RNF111Q6ZNA4 994 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 DDIASQ8IXT1 998 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 MARVELD2Q8N4S9 558 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 SUMF1Q8NBK3 374 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 SETD7Q8WTS6 366 aaKnown RBP14.92□□□□□ -0.02
SHMT2-202ENST00000414700 ABTB1Q969K4 478 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-202ENST00000414700 PRAP1Q96NZ9 151 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 NUSAP1Q9BXS6 441 aaKnown RBP14.92□□□□□ -0.02
SHMT2-202ENST00000414700 MRPS26Q9BYN8 205 aaKnown RBP14.92□□□□□ -0.02
SHMT2-202ENST00000414700 TWSG1Q9GZX9 223 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 GPRC5BQ9NZH0 403 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 TRPS1Q9UHF7 1281 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 SH3GLB1Q9Y371 365 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 RNF215Q9Y6U7 377 aa14.92□□□□□ -0.02
SHMT2-202ENST00000414700 PIPSLA2A3N6 862 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 SDHDO14521 159 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 KDM1AO60341 852 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 TFAP2AP05549 437 aa14.91□□□□□ -0.02
SHMT2-202ENST00000414700 JUPP14923 745 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms