RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CHMLP26374 656 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 HOXD10P28358 340 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 UQCRC1P31930 480 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 UGT1A3P35503 534 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 DLSTP36957 453 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 SOX2P48431 317 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 NR2C2P49116 596 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 STARP49675 285 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 EFNA5P52803 228 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 NAP1L1P55209 391 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CCL23P55773 120 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 EIF6P56537 245 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 TMPRSS3P57727 454 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ISL1P61371 349 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 SP3Q02447 781 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC10A7Q0GE19 358 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 IFRD2Q12894 506 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 TNFAIP1Q13829 316 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 RALBP1Q15311 655 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CNN3Q15417 329 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 DDR2Q16832 855 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 EDRF1Q3B7T1 1238 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 UAP1L1Q3KQV9 507 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 FBXO43Q4G163 708 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZC2HC1CQ53FD0 456 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CPTPQ5TA50 214 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CDCA2Q69YH5 1023 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF660Q6AZW8 331 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 AMMECR1LQ6DCA0 310 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 SULT1C3Q6IMI6 304 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 RGS7BPQ6MZT1 257 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 C16orf54Q6UWD8 224 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CLEC4GQ6UXB4 293 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 Q6ZTI0 123 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 KCTD8Q6ZWB6 473 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 PRSS45Q7RTY3 260 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 BNIPLQ7Z465 357 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 KDELC2Q7Z4H8 507 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 NOXA1Q86UR1 476 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 Q8IZM0 81 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 C1orf158Q8N1D5 194 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 FBXO39Q8N4B4 442 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 MARVELD2Q8N4S9 558 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CPA6Q8N4T0 437 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 C2orf73Q8N5S3 287 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CLDN19Q8N6F1 224 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 DCAF4L2Q8NA75 395 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 TEX19Q8NA77 164 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CHDHQ8NE62 594 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 OR6P1Q8NGX9 317 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 OR51F2Q8NH61 342 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF519Q8TB69 540 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ATP8B4Q8TF62 1192 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 GTSF1Q8WW33 167 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 MYDGFQ969H8 173 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAF2Q96CS3 445 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 SEH1LQ96EE3 360 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 DUS3LQ96G46 650 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 MBOAT7Q96N66 472 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 NT5C1BQ96P26 610 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 SMAD5Q99717 465 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 HDHD5Q9BXW7 423 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 PACSIN1Q9BY11 444 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CHST6Q9GZX3 395 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 USP44Q9H0E7 712 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 P2RY12Q9H244 342 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CXCL16Q9H2A7 254 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 TPK1Q9H3S4 243 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 TFB2MQ9H5Q4 396 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF665Q9H7R5 613 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 C1orf112Q9NSG2 853 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ACSS1Q9NUB1 689 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 GIMAP4Q9NUV9 329 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF701Q9NV72 531 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 PANK4Q9NVE7 773 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 MED9Q9NWA0 146 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CWC25Q9NXE8 425 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 TEX10Q9NXF1 929 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 STK32BQ9NY57 414 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 MGAT4CQ9UBM8 478 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF212Q9UDV6 495 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ITM2BQ9Y287 266 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 COQ6Q9Y2Z9 468 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 NFE2L3Q9Y4A8 694 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 RNF115Q9Y4L5 304 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 MROH7-TTC4A0A0A0MT08 1334 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 RTL1A6NKG5 1358 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 USP6P35125 1406 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ARHGAP31Q2M1Z3 1444 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 WDFY3Q8IZQ1 3526 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLIT2O94813 1529 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 MCM3APO60318 1980 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 IGHV4-4A0A075B6R2 117 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 IGHV1OR15-1A0A075B7D0 117 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 MBLAC1A4D2B0 266 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 CEACAM18A8MTB9 384 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ANHXE9PGG2 379 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 GPR39O43194 453 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PRODHO43272 600 aa-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms