RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MAPK12P53778 367 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 SRP54P61011 504 aaKnown RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 DLK1P80370 383 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 GALK2Q01415 458 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 CHIT1Q13231 466 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 RIPK1Q13546 671 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 PDE7AQ13946 482 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 SHROOM1Q2M3G4 852 aaPredicted RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 EPC2Q52LR7 807 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 HERC4Q5GLZ8 1057 aaPredicted RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 TCTE1Q5JU00 501 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 SIRPB2Q5JXA9 342 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 LRRC38Q5VT99 294 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 MFSD12Q6NUT3 480 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 CCBE1Q6UXH8 406 aaPredicted RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 MACC1Q6ZN28 852 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 KCTD8Q6ZWB6 473 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 COMMD2Q86X83 199 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 ZDHHC17Q8IUH5 632 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 AQP12AQ8IXF9 295 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 KLHDC8AQ8IYD2 350 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 ANKRD13CQ8N6S4 541 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 LMO3Q8TAP4 145 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 FGFBP3Q8TAT2 258 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 SECTM1Q8WVN6 248 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 SYN2Q92777 582 aaPredicted RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 CDKN2AIPNLQ96HQ2 116 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 IGSF21Q96ID5 467 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 THOC3Q96J01 351 aaKnown RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 MARK4Q96L34 752 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 C17orf77Q96MU5 243 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 DUX5Q96PT3 197 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 ZNF577Q9BSK1 485 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 DDX47Q9H0S4 455 aaKnown RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 CARD9Q9H257 536 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 ARRDC1-AS1Q9H2J1 176 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 FKRPQ9H9S5 495 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 B3GAT1Q9P2W7 334 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 LRWD1Q9UFC0 647 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 UBQLN2Q9UHD9 624 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 DNPEPQ9ULA0 475 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 EXOC6BQ9Y2D4 811 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 PEG3Q9GZU2 1588 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 URB2Q14146 1524 aaKnown RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 UBE4BO95155 1302 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 SMARCA4P51532 1647 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 DENND3A2RUS2 1198 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 NEMP2A6NFY4 417 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 PRR32B1ATL7 298 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 TLR4O00206 839 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 CLDN3O15551 220 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 SYNGR3O43761 229 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 GMFGO60234 142 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 CTSVO60911 334 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 SPAG6O75602 509 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 PLGP00747 810 aaPredicted RBP4.76□□□□□ -1.65
LSM5-206ENST00000409987 IGHV2-70P01814 119 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 IGHV4-39P01824 125 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 C9P02748 559 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 KRT8P05787 483 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 T-ENOLP0DO92 83 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 IER3P46695 156 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 NPBWR1P48145 328 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 LHX1P48742 406 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 SMSP52788 366 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 MFAP3P55082 362 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 MAT1AQ00266 395 aaKnown RBP4.76□□□□□ -1.65
LSM5-206ENST00000409987 EEF1A2Q05639 463 aaKnown RBP4.76□□□□□ -1.65
LSM5-206ENST00000409987 ARHGAP1Q07960 439 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 FHL1Q13642 323 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 RAPSNQ13702 412 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 ZNF585BQ52M93 769 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 SYT14P1Q58G82 188 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 ZNF324BQ6AW86 544 aaPredicted RBP4.76□□□□□ -1.65
LSM5-206ENST00000409987 CENPPQ6IPU0 288 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 CYB5D1Q6P9G0 228 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 WDR88Q6ZMY6 472 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 NRARPQ7Z6K4 114 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 TAF8Q7Z7C8 310 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 ADAMTSL2Q86TH1 951 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 AMZ2Q86W34 360 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 GPALPP1Q8IXQ4 340 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 DCP1BQ8IZD4 617 aaKnown RBP4.76□□□□□ -1.65
LSM5-206ENST00000409987 BANPQ8N9N5 519 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 OR13J1Q8NGT2 312 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 SSMEM1Q8WWF3 244 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 ARHGAP45Q92619 1136 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 TUBGCP3Q96CW5 907 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 FAM213AQ9BRX8 229 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 ATG101Q9BSB4 218 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 EVA1AQ9H8M9 152 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 ECT2Q9H8V3 914 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 RPF1Q9H9Y2 349 aaKnown RBP4.76□□□□□ -1.65
LSM5-206ENST00000409987 PELI2Q9HAT8 420 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 SLC38A7Q9NVC3 462 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 TMOD3Q9NYL9 352 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 PTTG2Q9NZH5 202 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 NAP1L2Q9ULW6 460 aaPredicted RBP4.76□□□□□ -1.65
LSM5-206ENST00000409987 NUDCQ9Y266 331 aa4.76□□□□□ -1.65
LSM5-206ENST00000409987 IFT140Q96RY7 1462 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms