RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 FOXM1Q08050 763 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 ACSM2AQ08AH3 577 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 INCA1Q0VD86 236 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 PPIGQ13427 754 aaKnown RBP eCLIP4.14□□□□□ -1.752e-9■□□□□ 10.5
CLK1-203ENST00000409769 SYT16Q17RD7 645 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 ZNF699Q32M78 642 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 DCST1Q5T197 706 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 SFMBT2Q5VUG0 894 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 FAAH2Q6GMR7 532 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 LCN10Q6JVE6 187 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 DUS1LQ6P1R4 473 aaKnown RBP4.14□□□□□ -1.75
CLK1-203ENST00000409769 ENOSF1Q7L5Y1 443 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 PXKQ7Z7A4 578 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 CPLX4Q7Z7G2 160 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 TSPAN33Q86UF1 283 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 FAM71AQ8IYT1 594 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 RNF113BQ8IZP6 322 aaKnown RBP4.14□□□□□ -1.75
CLK1-203ENST00000409769 PAF1Q8N7H5 531 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 CCDC112Q8NEF3 446 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 OR2AK2Q8NG84 335 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 BADQ92934 168 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 TOP1MTQ969P6 601 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 HPDLQ96IR7 371 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 ZNF560Q96MR9 790 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 ZNF830Q96NB3 372 aaPredicted RBP4.14□□□□□ -1.75
CLK1-203ENST00000409769 CHP1Q99653 195 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 BAG1Q99933 345 aaPredicted RBP4.14□□□□□ -1.75
CLK1-203ENST00000409769 SDCBP2Q9H190 292 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 CYP3A43Q9HB55 503 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 UBE2TQ9NPD8 197 aaPredicted RBP4.14□□□□□ -1.75
CLK1-203ENST00000409769 TBC1D13Q9NVG8 400 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 MARCH5Q9NX47 278 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 CNOT8Q9UFF9 292 aaKnown RBP4.14□□□□□ -1.75
CLK1-203ENST00000409769 LOXL2Q9Y4K0 774 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 NME7Q9Y5B8 376 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 PIAS3Q9Y6X2 628 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 GREB1Q4ZG55 1949 aa4.14□□□□□ -1.75
CLK1-203ENST00000409769 MTCL1Q9Y4B5 1905 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 MYO9BQ13459 2157 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 ZNF638Q14966 1978 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 A0A0G2JPF8 293 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 CASTOR2A6NHX0 329 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 KPNA7A9QM74 516 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 HNRNPCL3B7ZW38 293 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 CLGNO14967 610 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 ZNF263O14978 683 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 HNRNPCL1O60812 293 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 NDUFS3O75489 264 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 GFPT2O94808 682 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 NKX2-2O95096 273 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 SERPING1P05155 500 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 PTMAP06454 111 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 PLEKP08567 350 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 KRT19P08727 400 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 PNMA6AP0CW24 399 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 HNRNPCL4P0DMR1 293 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 SKILP12757 684 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 FERP16591 822 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 UGT1A1P22309 533 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 WARSP23381 471 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 ANXA13P27216 316 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 APOBEC1P41238 236 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 MRPS34P82930 218 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 SLC20A2Q08357 652 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 RBM39Q14498 530 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 MTF1Q14872 753 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 MYLK3Q32MK0 819 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 ZNF280DQ6N043 979 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 PSRC1Q6PGN9 363 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 RAD9BQ6WBX8 426 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 ZNF771Q7L3S4 317 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 ZNF571Q7Z3V5 609 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 SLC47A2Q86VL8 602 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 TMEM219Q86XT9 240 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 LRRC43Q8N309 656 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 FRMD1Q8N878 549 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 LMNTD1Q8N9Z9 388 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 ZNF397Q8NF99 534 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 OR14L1PQ8NHC6 308 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 SPATA18Q8TC71 538 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 URGCPQ8TCY9 931 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 RHBDF1Q96CC6 855 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 GRAMD2BQ96HH9 432 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 SPAG5Q96R06 1193 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 EPYCQ99645 322 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 MRPL45Q9BRJ2 306 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 TMEM175Q9BSA9 504 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 MRPL9Q9BYD2 267 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 HAUS4Q9H6D7 363 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 CWH43Q9H720 699 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 SMYD3Q9H7B4 428 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 NHEJ1Q9H9Q4 299 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 POLR1BQ9H9Y6 1135 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 RANGRFQ9HD47 186 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 CISHQ9NSE2 258 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 CACNG4Q9UBN1 327 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 AASSQ9UDR5 926 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 DNAJB4Q9UDY4 337 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 HMGXB4Q9UGU5 601 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 NOCTQ9UK39 431 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms