RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 C1orf21Q9H246 121 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 HRASLS2Q9NWW9 162 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ACTR10Q9NZ32 417 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ZIM2Q9NZV7 527 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 CCDC154A6NI56 674 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 A8MUI8 341 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 MRASO14807 208 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 ANKRD28O15084 1053 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 PPM1DO15297 605 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 MYO1DO94832 1006 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 CCNDBP1O95273 360 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 MAPK1P28482 360 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 GRK3P35626 688 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 BCL6P41182 706 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 PIK3CBP42338 1070 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 ZFP36L2P47974 494 aaKnown RBP11.94□□□□□ -0.5
CHMP3-204ENST00000409727 DGKQP52824 942 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 PPP1CAP62136 330 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 ABATP80404 500 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 PLIN5Q00G26 463 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 TBL3Q12788 808 aaKnown RBP11.94□□□□□ -0.5
CHMP3-204ENST00000409727 LPAL2Q16609 132 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 SMU1Q2TAY7 513 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 DNAL1Q4LDG9 190 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 ZNF438Q7Z4V0 828 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 RETREG3Q86VR2 466 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 SYT12Q8IV01 421 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 FCRL4Q96PJ5 515 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 OR2A14Q96R47 310 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 ZBTB18Q99592 522 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 SORBS1Q9BX66 1292 aaKnown RBP11.94□□□□□ -0.5
CHMP3-204ENST00000409727 PILRBQ9UKJ0 227 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 PACSIN3Q9UKS6 424 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 NDUFAF1Q9Y375 327 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 TMED5Q9Y3A6 229 aa11.94□□□□□ -0.5
CHMP3-204ENST00000409727 GNG14A0A1W2PPG7 69 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 FAM234BA2RU67 622 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 LMO7DNF2Z398 122 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 ZW10O43264 779 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 AKAP10O43572 662 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 NOBOXO60393 691 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 PDE5AO76074 875 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 CFIP05156 583 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 MAGP20916 626 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 RAE1P78406 368 aaKnown RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 BNC1Q01954 994 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 GRIK2Q13002 908 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 COL9A2Q14055 689 aaPredicted RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 RCAN2Q14206 197 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 KIR2DS3Q14952 304 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 SPIN4Q56A73 249 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 PRR23BQ6ZRT6 265 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 WDR48Q8TAF3 677 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 ZFPM2Q8WW38 1151 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 RSC1A1Q92681 617 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 SLC22A18Q96BI1 424 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 F2RL3Q96RI0 385 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 SLC39A3Q9BRY0 314 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 WDR41Q9HAD4 459 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 TMEM184CQ9NVA4 438 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 NMRK1Q9NWW6 199 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 RUVBL1Q9Y265 456 aaKnown RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 TP53BP1Q12888 1972 aaPredicted RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 C2orf74A8MZ97 194 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 PCDH7O60245 1069 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 PRAMEF10O60809 474 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 ANXA4P09525 319 aaPredicted RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 PRPS2P11908 318 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 PVRP15151 417 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 JAK1P23458 1154 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 PTX3P26022 381 aaPredicted RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 CTSKP43235 329 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 MRPL19P49406 292 aaKnown RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 IRX1P78414 480 aaPredicted RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 ZNF423Q2M1K9 1284 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 FAM174BQ3ZCQ3 159 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 C10orf62Q5T681 223 aaPredicted RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 C16orf89Q6UX73 402 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 COMMD6Q7Z4G1 85 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 C11orf74Q86VG3 221 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 FLVCR1-AS1Q8TAF5 88 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 CHTF18Q8WVB6 975 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 SERPINI1Q99574 410 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 SLC38A3Q99624 504 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 RHBGQ9H310 441 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 ASIC5Q9NY37 505 aa11.93□□□□□ -0.5
CHMP3-204ENST00000409727 SNRNP200O75643 2136 aaKnown RBP11.93□□□□□ -0.5
CHMP3-204ENST00000409727 A0A0G2JN53 185 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 A0A1W2PP18 115 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 TRBC2A0A5B9 178 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 ASPDHA6ND91 283 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 BBIP1A8MTZ0 92 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 NPIPB8E9PQR5 432 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 RTCAO00442 366 aaKnown RBP11.92□□□□□ -0.5
CHMP3-204ENST00000409727 SORBS2O94875 1100 aaKnown RBP11.92□□□□□ -0.5
CHMP3-204ENST00000409727 TBX6O95947 436 aaPredicted RBP11.92□□□□□ -0.5
CHMP3-204ENST00000409727 KLK1P06870 262 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 MYF5P13349 255 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 LSSP48449 732 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 RAP1GDS1P52306 607 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms