RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CSNK1EP49674 416 aaKnown RBP13.49□□□□□ -0.25
GPNMB-203ENST00000409458 ABATP80404 500 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 FAM174BQ3ZCQ3 159 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 PIGGQ5H8A4 983 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 SPANXN4Q5MJ08 99 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 WASHC2DQ5SRD0 308 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 KIAA1614Q5VZ46 1190 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 NET1Q7Z628 596 aaPredicted RBP13.49□□□□□ -0.25
GPNMB-203ENST00000409458 GLB1L3Q8NCI6 653 aaPredicted RBP13.49□□□□□ -0.25
GPNMB-203ENST00000409458 FAM46DQ8NEK8 389 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 FLVCR1-AS1Q8TAF5 88 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 CCDC124Q96CT7 223 aaKnown RBP13.49□□□□□ -0.25
GPNMB-203ENST00000409458 METTL2AQ96IZ6 378 aaKnown RBP13.49□□□□□ -0.25
GPNMB-203ENST00000409458 EGLN2Q96KS0 407 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 SERPINI1Q99574 410 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 PITHD1Q9GZP4 211 aaPredicted RBP13.49□□□□□ -0.25
GPNMB-203ENST00000409458 NT5DC2Q9H857 520 aa13.49□□□□□ -0.25
GPNMB-203ENST00000409458 CACNA1IQ9P0X4 2223 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 CCDC163A0A0D9SF12 145 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 DYTNA2CJ06 578 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 HAT1O14929 419 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 PCDH7O60245 1069 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 LCMT2O60294 686 aaKnown RBP13.48□□□□□ -0.25
GPNMB-203ENST00000409458 ENTPD5O75356 428 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 MYO1DO94832 1006 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 CMPK1P30085 196 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 TIA1P31483 386 aaKnown RBP eCLIP13.48□□□□□ -0.25
GPNMB-203ENST00000409458 SRSF5Q13243 272 aaKnown RBP13.48□□□□□ -0.25
GPNMB-203ENST00000409458 RIPK1Q13546 671 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 NFYCQ13952 458 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 CAPRIN1Q14444 709 aaKnown RBP13.48□□□□□ -0.25
GPNMB-203ENST00000409458 ELOCQ15369 112 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 WDR45BQ5MNZ6 344 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 C1orf146Q5VVC0 180 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 COMMD6Q7Z4G1 85 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 WDR5BQ86VZ2 330 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 SYT12Q8IV01 421 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 LMX1AQ8TE12 382 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 GFM2Q969S9 779 aaKnown RBP13.48□□□□□ -0.25
GPNMB-203ENST00000409458 TMEM74Q96NL1 305 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 GPATCH1Q9BRR8 931 aaKnown RBP13.48□□□□□ -0.25
GPNMB-203ENST00000409458 DPH7Q9BTV6 452 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 MS4A8Q9BY19 250 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 SPAG4Q9NPE6 437 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 ADA2Q9NZK5 511 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 KLHL20Q9Y2M5 609 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 TECTAO75443 2155 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 SPAG17Q6Q759 2223 aa13.48□□□□□ -0.25
GPNMB-203ENST00000409458 TNRC6BQ9UPQ9 1833 aaKnown RBP13.48□□□□□ -0.25
GPNMB-203ENST00000409458 GON4LQ3T8J9 2241 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 TRBC2A0A5B9 178 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 OR6C74A6NCV1 312 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 ANKDD1BA6NHY2 528 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 VILLO15195 856 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 BCAT2O15382 392 aaPredicted RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 OR1F1O43749 312 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SERPINB1P30740 379 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 BCL6P41182 706 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SLC7A2P52569 658 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 CLNS1AP54105 237 aaKnown RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 MAZP56270 477 aaKnown RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 KIR2DS3Q14952 304 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 TRMT5Q32P41 509 aaKnown RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SLC9B2Q86UD5 537 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 TRIM73Q86UV7 250 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 ZNF761Q86XN6 746 aaPredicted RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 RIMKLAQ8IXN7 391 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 FAM9CQ8IZT9 166 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 METTL4Q8N3J2 472 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 RNF148Q8N7C7 305 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 ZNF548Q8NEK5 533 aaPredicted RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 OR10G6Q8NH81 332 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 WDR48Q8TAF3 677 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 ZFPM2Q8WW38 1151 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SLC13A3Q8WWT9 602 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 LRRC58Q96CX6 371 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 OR2A14Q96R47 310 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 TMEM184CQ9NVA4 438 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 GID8Q9NWU2 228 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 NMRK1Q9NWW6 199 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SIRT5Q9NXA8 310 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SLAMF8Q9P0V8 285 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 ADGRE2Q9UHX3 823 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 AKAP10O43572 662 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 GBAP04062 536 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 IL6P05231 212 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 PGRP06401 933 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 ANXA4P09525 319 aaPredicted RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 UGT2B7P16662 529 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 POLR2CP19387 275 aaPredicted RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 PTX3P26022 381 aaPredicted RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 AFF3P51826 1226 aaKnown RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 C21orf59P57076 290 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 HHEXQ03014 270 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 HKDC1Q2TB90 917 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 ZNF425Q6IV72 752 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 GALNT18Q6P9A2 607 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 DHDDSQ86SQ9 333 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms