RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 IQCCQ4KMZ1 466 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 ZDHHC14Q8IZN3 488 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 DDX1Q92499 740 aaKnown RBP24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 IGSF8Q969P0 613 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 TRBC2A0A5B9 178 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 TMCO2Q7Z6W1 182 aaPredicted RBP24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 LINC00471Q8N535 108 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 MMABQ96EY8 250 aaPredicted RBP24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 IL21RQ9HBE5 538 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 DUX1O43812 170 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 RCBTB2O95199 551 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 FOSL2P15408 326 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 CD47Q08722 323 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 ING3Q9NXR8 418 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 AQP12BA6NM10 295 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 GDI2P50395 445 aaKnown RBP24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 PTPRCAPQ14761 206 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 ALG1LQ6GMV1 187 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 QSOX2Q6ZRP7 698 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 AQP12AQ8IXF9 295 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 PDE7BQ9NP56 450 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 POMPQ9Y244 141 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 WBP11Q9Y2W2 641 aaKnown RBP24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 PIAS3Q9Y6X2 628 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 CTSAP10619 480 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 MTHFD1P11586 935 aaKnown RBP24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 RAB2AP61019 212 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 PRPF38BQ5VTL8 546 aaKnown RBP24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 TTC34A8MYJ7 566 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 MATN1P21941 496 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 VSX2P58304 361 aaPredicted RBP24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 DMPKQ09013 629 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 RAB33AQ14088 237 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 CDH24Q86UP0 819 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 P2RY8Q86VZ1 359 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 NFKBIDQ8NI38 313 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 SCAMP4Q969E2 229 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 DGCR14Q96DF8 476 aaKnown RBP24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 OR8D2Q9GZM6 311 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 LDB2O43679 373 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 AIREO43918 545 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 BEST1O76090 585 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 CENPMQ9NSP4 180 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 ZDHHC2Q9UIJ5 367 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 NTSR1P30989 418 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 DGKQP52824 942 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 CLEC12AQ5QGZ9 265 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 NANOGNBQ7Z5D8 188 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 TICAM1Q8IUC6 712 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 LGI4Q8N135 537 aa24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 CADM1Q9BY67 442 aaKnown RBP24.3■■□□□ 1.48
SPIRE1-202ENST00000409402 AGPSO00116 658 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 MTRF1O75570 445 aaKnown RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 FHP07954 510 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 JUNDP17535 347 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 DNAJA1P31689 397 aaKnown RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 DSC3Q14574 896 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 ANKFN1Q8N957 763 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 MS4A12Q9NXJ0 267 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 TAS2R7Q9NYW3 318 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 PCDHGB1Q9Y5G3 927 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 COL2A1P02458 1487 aaPredicted RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 SUOXP51687 545 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 OMA1Q96E52 524 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 CDCA3Q99618 268 aaPredicted RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.29■■□□□ 1.483e-6■■■■□ 24.6
SPIRE1-202ENST00000409402 DENND2DQ9H6A0 471 aaPredicted RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 PRTFDC1Q9NRG1 225 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 FAM240BA0A1B0GVZ2 78 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 SLC16A5O15375 505 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 OAZ2O95190 189 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 OPN1SWP03999 348 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 TSPAN5P62079 268 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 UBE2J2Q8N2K1 259 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 NKD1Q969G9 470 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 IMP4Q96G21 291 aaKnown RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 MVB12BQ9H7P6 319 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 CAPN5O15484 640 aaPredicted RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 PGRP06401 933 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 LINGO3P0C6S8 592 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 C10orf62Q5T681 223 aaPredicted RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 NPAS3Q8IXF0 933 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 TXNDC5Q8NBS9 432 aaKnown RBP24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 C17orf62Q9BQA9 187 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 PAAF1Q9BRP4 392 aa24.29■■□□□ 1.48
SPIRE1-202ENST00000409402 H3BNX3 289 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 H7BY64 318 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 MUSKO15146 869 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 CRTC2Q53ET0 693 aaPredicted RBP24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 GPRIN1Q7Z2K8 1008 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 KLHL36Q8N4N3 616 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 PRAP1Q96NZ9 151 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 COPS4Q9BT78 406 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 SEC61A2Q9H9S3 476 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 LRP6O75581 1613 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 AHSA1O95433 338 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 MPC1LP0DKB6 136 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 ACRV1P26436 265 aa24.28■■□□□ 1.48
SPIRE1-202ENST00000409402 PER3P56645 1201 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms