RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 HAT1O14929 419 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 CYC1P08574 325 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 PKMP14618 531 aaKnown RBP15.69■□□□□ 0.1
CHMP3-203ENST00000409225 EZRP15311 586 aaKnown RBP15.69■□□□□ 0.1
CHMP3-203ENST00000409225 RFC3P40938 356 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 AGTR2P50052 363 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 TAS2R50P59544 299 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 ACTN3Q08043 901 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-203ENST00000409225 CDH17Q12864 832 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 PTK6Q13882 451 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 TRIM14Q14142 442 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 P3H1Q32P28 736 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 AARS2Q5JTZ9 985 aaKnown RBP15.69■□□□□ 0.1
CHMP3-203ENST00000409225 ZNF425Q6IV72 752 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 C11orf63Q6NUN7 778 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 CAVIN1Q6NZI2 390 aaKnown RBP15.69■□□□□ 0.1
CHMP3-203ENST00000409225 AADACL2Q6P093 401 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 OTOAQ7RTW8 1153 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 LINC00523Q86TU6 105 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 RPRMLQ8N4K4 120 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 OR9A1PQ8NGU1 263 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 OR51Q1Q8NH59 317 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 RND1Q92730 232 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 MRFAP1L1Q96HT8 127 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 CATSPERZQ9NTU4 200 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 ABCF3Q9NUQ8 709 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 UTP6Q9NYH9 597 aaKnown RBP15.69■□□□□ 0.1
CHMP3-203ENST00000409225 MARCH4Q9P2E8 410 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-203ENST00000409225 TFR2Q9UP52 801 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 USP27XA6NNY8 438 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 H0YIG0 161 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 KPNA5O15131 536 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 ZNF189O75820 626 aaPredicted RBP15.68■□□□□ 0.1
CHMP3-203ENST00000409225 GAS8O95995 478 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 PTPN7P35236 360 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 GDF10P55107 478 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.68■□□□□ 0.1
CHMP3-203ENST00000409225 ICE2Q659A1 982 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 MCOLN3Q8TDD5 553 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 LIME1Q9H400 295 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 DLL4Q9NR61 685 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 AKAP6Q13023 2319 aa15.68■□□□□ 0.1
CHMP3-203ENST00000409225 HEATR5BQ9P2D3 2071 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 SGK494L7N484 410 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 HS6ST1O60243 411 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 TJP3O95049 919 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 CCNDBP1O95273 360 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 NSA2O95478 260 aaKnown RBP15.67■□□□□ 0.1
CHMP3-203ENST00000409225 TPM3P06753 285 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 ERGP11308 486 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 IL1RNP18510 177 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 TPP2P29144 1249 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-203ENST00000409225 CTNNA1P35221 906 aaKnown RBP15.67■□□□□ 0.1
CHMP3-203ENST00000409225 MAGEA1P43355 309 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 MEOX1P50221 254 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 ACVR1Q04771 509 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 PRDX1Q06830 199 aaKnown RBP15.67■□□□□ 0.1
CHMP3-203ENST00000409225 USP10Q14694 798 aaKnown RBP15.67■□□□□ 0.1
CHMP3-203ENST00000409225 ANKRD20A4Q4UJ75 823 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 PPP1R21Q6ZMI0 780 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 RPS19BP1Q86WX3 136 aaKnown RBP15.67■□□□□ 0.1
CHMP3-203ENST00000409225 KIF2BQ8N4N8 673 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 PPFIBP2Q8ND30 876 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 TMEM125Q96AQ2 219 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 SEC16BQ96JE7 1060 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 LPAR4Q99677 370 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 RBCK1Q9BYM8 510 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 P2RY12Q9H244 342 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 TP63Q9H3D4 680 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-203ENST00000409225 ST6GALNAC2Q9UJ37 374 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 RIMKLBQ9ULI2 386 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 RPH3AQ9Y2J0 694 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-203ENST00000409225 PCDHA3Q9Y5H8 950 aa15.67■□□□□ 0.1
CHMP3-203ENST00000409225 ARHGEF33A8MVX0 844 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 KLK8O60259 260 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 MFAP3LO75121 409 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 CDC123O75794 336 aaPredicted RBP15.66■□□□□ 0.1
CHMP3-203ENST00000409225 PDE9AO76083 593 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 TPM1P09493 284 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 TFEBP19484 476 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 ADRA1DP25100 572 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 CYB561P49447 251 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 TTPAP49638 278 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 NUP107P57740 925 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 SLC26A5P58743 744 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 LTBQ06643 244 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 PMPCAQ10713 525 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 ABRAXAS2Q15018 415 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 NSDHLQ15738 373 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 Q71RC1 249 aaPredicted RBP15.66■□□□□ 0.1
CHMP3-203ENST00000409225 ZNF227Q86WZ6 799 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 CLYBLQ8N0X4 340 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 LGI4Q8N135 537 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 POGLUT1Q8NBL1 392 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 TSLPQ969D9 159 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 FAM136AQ96C01 138 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 MACROD1Q9BQ69 325 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 POLDIP3Q9BY77 421 aaKnown RBP15.66■□□□□ 0.1
CHMP3-203ENST00000409225 SLC24A3Q9HC58 644 aa15.66■□□□□ 0.1
CHMP3-203ENST00000409225 PLEKHA6Q9Y2H5 1048 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms