RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SLC39A1Q9NY26 324 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 MAT2BQ9NZL9 334 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 ASF1AQ9Y294 204 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 LRRN3E7EW58 273 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 TNFRSF10AO00220 468 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 PRKYO43930 277 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 KCNC4Q03721 635 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 NOMO2Q5JPE7 1267 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 FBXO42Q6P3S6 717 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 LRRC70Q7Z2Q7 622 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 ZNF598Q86UK7 904 aaKnown RBP17.16■□□□□ 0.34
SMPD4-202ENST00000409031 ARRDC4Q8NCT1 418 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 FRS2Q8WU20 508 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 L3HYPDHQ96EM0 354 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 TSSK6Q9BXA6 273 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 LRRN3Q9H3W5 708 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 SAV1Q9H4B6 383 aaPredicted RBP17.16■□□□□ 0.34
SMPD4-202ENST00000409031 TMEM27Q9HBJ8 222 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 SIX4Q9UIU6 781 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 CDH11P55287 796 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 NHSL2Q5HYW2 709 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 TNFAIP8L2Q6P589 184 aaPredicted RBP17.16■□□□□ 0.34
SMPD4-202ENST00000409031 YAF2Q8IY57 180 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 OR7D4Q8NG98 312 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 NEIL3Q8TAT5 605 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 EXOSC8Q96B26 276 aaKnown RBP17.16■□□□□ 0.34
SMPD4-202ENST00000409031 BRD7Q9NPI1 651 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 IL37Q9NZH6 218 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 NPAP1Q9NZP6 1156 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 SH3D21A4FU49 640 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 URODP06132 367 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 RETP07949 1114 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 CRISP3P54108 245 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 AP1S1P61966 158 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 GPALPP1Q8IXQ4 340 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 TSGA13Q96PP4 275 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 MYH13Q9UKX3 1938 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 ZCWPW2A0A1B0GU75 182 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 SMIM35A0A1B0GVV1 85 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 GRXCR2A6NFK2 248 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 RFPL3O75679 317 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 C22orf31O95567 290 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 SPATA31D3P0C874 917 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 CKMT1AP12532 417 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 ARL4DP49703 201 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 GBX2P52951 348 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-202ENST00000409031 SPATA31D4Q6ZUB0 917 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 OR8J1Q8NGP2 316 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 OR5H6Q8NGV6 325 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 CMTM7Q96FZ5 175 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 LPIN3Q9BQK8 851 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 GLS2Q9UI32 602 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 MGAT4AQ9UM21 535 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 ANKRD34BA5PLL1 514 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 ANXA2P2A6NMY6 339 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 SOBPA7XYQ1 873 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 DISC1C4P0D8 188 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 ANXA2P07355 339 aaKnown RBP17.15■□□□□ 0.34
SMPD4-202ENST00000409031 TAF10Q12962 218 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 DTWD1Q8N5C7 304 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 NATD1Q8N6N6 113 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 ZBED6CLQ96FA7 236 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-202ENST00000409031 TSNAXQ99598 290 aaKnown RBP17.15■□□□□ 0.34
SMPD4-202ENST00000409031 PDGFDQ9GZP0 370 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-202ENST00000409031 COPZ2Q9P299 210 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 TMEM221A6NGB7 291 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 FGF4P08620 206 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 TUSC3Q13454 348 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 NFE2L1Q14494 772 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 EIF4HQ15056 248 aaKnown RBP17.15■□□□□ 0.34
SMPD4-202ENST00000409031 GHDCQ8N2G8 530 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 PEX13Q92968 403 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 TXNDC15Q96J42 360 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 FAM129BQ96TA1 746 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 TNKS2Q9H2K2 1166 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 CPA4Q9UI42 421 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 EDARQ9UNE0 448 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 GLUD1P00367 558 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 EPCAMP16422 314 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 HK1P19367 917 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 SH3BP2P78314 561 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 PRKCDQ05655 676 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 EIF2B5Q13144 721 aaKnown RBP17.15■□□□□ 0.34
SMPD4-202ENST00000409031 FAM117BQ6P1L5 589 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 GRIN3AQ8TCU5 1115 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 ADAMTS16Q8TE57 1224 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 MUL1Q969V5 352 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 DOHHQ9BU89 302 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 FARSBQ9NSD9 589 aaKnown RBP17.15■□□□□ 0.34
SMPD4-202ENST00000409031 COQ3Q9NZJ6 369 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
SMPD4-202ENST00000409031 FER1L4A9Z1Z3 1794 aa17.14■□□□□ 0.34
SMPD4-202ENST00000409031 TEX51A0A1B0GUA7 166 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 ABHD14A-ACY1A0A1B0GW23 586 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 HAS3O00219 553 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 HOXD10P28358 340 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 RORAP35398 523 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 GPR33Q49SQ1 333 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms