RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 CPNE5Q9HCH3 593 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 SLC17A6Q9P2U8 582 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 COPS7AQ9UBW8 275 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 PCDHGB5Q9Y5G0 923 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 FLRT2O43155 660 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 G6PDP11413 515 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 OGFRL1Q5TC84 451 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 SLC25A25Q6KCM7 469 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 MCEMP1Q8IX19 187 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 ELMOD2Q8IZ81 293 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 HDDC3Q8N4P3 179 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 C1orf52Q8N6N3 182 aaKnown RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 PSD4Q8NDX1 1056 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 OR2L8Q8NGY9 312 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 FAM110BQ8TC76 370 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 TCEAL4Q96EI5 215 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 CD180Q99467 661 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 ZNF717Q9BY31 904 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 FAIMQ9NVQ4 179 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 TAS2R9Q9NYW1 312 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 NLGN3Q9NZ94 848 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 ABCD2Q9UBJ2 740 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 PCDHB3Q9Y5E6 796 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 OR2B3O76000 313 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 OR4Q2P0C623 313 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 CYS1Q717R9 158 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 CPNE8Q86YQ8 564 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 OR56A1Q8NGH5 318 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 OR9I1Q8NGQ6 314 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 LMLNQ96KR4 655 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 FOLH1BQ9HBA9 442 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 SRRDQ9UH36 339 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 LRRC72A6NJI9 287 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 NT5C1B-RDH14C9J2C7 533 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 HOXD8P13378 290 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 FOSL2P15408 326 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 HTR2AP28223 471 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 BMP8BP34820 402 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 EVX2Q03828 476 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 SP140Q13342 867 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 PLEKHN1Q494U1 663 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 CYBRD1Q53TN4 286 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 SIRPB2Q5JXA9 342 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 ZNF678Q5SXM1 525 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 BMP8AQ7Z5Y6 402 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 GID4Q8IVV7 300 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 ZNF527Q8NB42 609 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 TRIM43Q96BQ3 446 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 SPATA9Q9BWV2 254 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 MRPS30Q9NP92 439 aaKnown RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 TIGARQ9NQ88 270 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 TMEM184CQ9NVA4 438 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 IGKV6D-41A0A0C4DH26 115 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 PTTG1O95997 202 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 DCKP27707 260 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 GALNT2Q10471 571 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 PRAMEF19Q5SWL8 479 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 GRHL2Q6ISB3 625 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 GOLGA7Q7Z5G4 137 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 AMZ2Q86W34 360 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 TREML1Q86YW5 311 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 LGALS12Q96DT0 336 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 ADAD1Q96M93 576 aaKnown RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 CAPN5O15484 640 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 CHRM1P11229 460 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 VAMP1P23763 118 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 CTNNB1P35222 781 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 HNRNPA0Q13151 305 aaKnown RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 MAD2L1BPQ15013 274 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 SCGB2B2Q4G0G5 96 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 SNX29P2Q8IUI4 249 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 SLC15A3Q8IY34 581 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 TMEM145Q8NBT3 493 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 C2CD4AQ8NCU7 369 aaPredicted RBP12.6□□□□□ -0.39
RNF43-201ENST00000407977 PROKR2Q8NFJ6 384 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 OR5J2Q8NH18 312 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 HSPA12BQ96MM6 686 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 TMEM74Q96NL1 305 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 ZNF700Q9H0M5 742 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 PLEKHA6Q9Y2H5 1048 aa12.6□□□□□ -0.39
RNF43-201ENST00000407977 ZNF701M0R085 212 aaPredicted RBP12.59□□□□□ -0.39
RNF43-201ENST00000407977 RFPL2O75678 378 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 CXCL14O95715 111 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 LHCGRP22888 699 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 NDUFS1P28331 727 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 SOWAHAQ2M3V2 549 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 COQ5Q5HYK3 327 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 UBE2Q1Q7Z7E8 422 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 RPLP0P6Q8NHW5 317 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 KCNH6Q9H252 994 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 SMURF1Q9HCE7 757 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 CD84Q9UIB8 345 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 PADI3Q9ULW8 664 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 C14orf166Q9Y224 244 aaKnown RBP12.59□□□□□ -0.39
RNF43-201ENST00000407977 WTIPA6NIX2 430 aaPredicted RBP12.59□□□□□ -0.39
RNF43-201ENST00000407977 CLCA1A8K7I4 914 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 CNTN5O94779 1100 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 OPN1SWP03999 348 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 BCHEP06276 602 aa12.59□□□□□ -0.39
RNF43-201ENST00000407977 LMO2P25791 158 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms