RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 HIST1H2AGP0C0S8 130 aaPredicted RBP18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 CDH1P12830 882 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 HIST1H2ADP20671 130 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 BCL6P41182 706 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 EEF1A2Q05639 463 aaKnown RBP18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 CRB2Q5IJ48 1285 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 FAM45BPQ6NSW5 357 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 LCTLQ6UWM7 567 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 IGFL2Q6UWQ7 119 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 FBXO36Q8NEA4 188 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 FAM45AQ8TCE6 357 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 HIST1H2AHQ96KK5 128 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 HIST1H2AJQ99878 128 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 WDR77Q9BQA1 342 aaPredicted RBP18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 H2AFJQ9BTM1 129 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 C14orf105Q9NVL8 296 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 CORO1CQ9ULV4 474 aaPredicted RBP18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 PCDHGA10Q9Y5H3 936 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 SCN2AQ99250 2005 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 SVILO95425 2214 aa18.29■□□□□ 0.52
SMARCB1-204ENST00000407422 JRKO75564 520 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 KLHL18O94889 574 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 HEXBP07686 556 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 SAT1P21673 171 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 FRG1Q14331 258 aaKnown RBP18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 NDUFA9Q16795 377 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 EIF2S3LQ2VIR3 472 aaKnown RBP18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 LINC00696Q6ZRV3 163 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 NDUFAF7Q7L592 441 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 ZFATQ9P243 1243 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 NTNG1Q9Y2I2 539 aa18.28■□□□□ 0.52
SMARCB1-204ENST00000407422 NSG1A0A0A6YYJ2 146 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 E7ESA3 106 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 SEMA7AO75326 666 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 PIAS1O75925 651 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 GUCA1CO95843 209 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 IL1RNP18510 177 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 CCND1P24385 295 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 VARSP26640 1264 aaKnown RBP18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 AVPR1BP47901 424 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 GLRBP48167 497 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 MEF2AQ02078 507 aaPredicted RBP18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 MGAT5Q09328 741 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 FHL5Q5TD97 284 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 CAPN13Q6MZZ7 669 aaPredicted RBP18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 TMEM214Q6NUQ4 689 aaKnown RBP18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 STRA8Q7Z7C7 330 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 KCT2Q8NC54 265 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 DNAJB14Q8TBM8 379 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 PPP4R1Q8TF05 950 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 TM4SF19Q96DZ7 209 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 PSMG3-AS1Q96PY0 264 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 OR4K3Q96R72 315 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 SLC29A3Q9BZD2 475 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 MOCS1Q9NZB8 636 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 MKL2Q9ULH7 1088 aa18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 NOVA2Q9UNW9 492 aaKnown RBP18.27■□□□□ 0.52
SMARCB1-204ENST00000407422 IGHV1-45A0A0A0MS14 117 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 BLACEA4D250 179 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 BMP10O95393 424 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 CELA2AP08217 269 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 CXCR2P25025 360 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 AP1S2P56377 157 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 ZNF460Q14592 562 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 NR6A1Q15406 480 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 DUPD1Q68J44 220 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 SBSNQ6UWP8 590 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 SLC26A11Q86WA9 606 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 ZC3HC1Q86WB0 502 aaKnown RBP18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 KBTBD2Q8IY47 623 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 OR56A3Q8NH54 315 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 ZCCHC10Q8TBK6 192 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 PSMF1Q92530 271 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 THAP11Q96EK4 314 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 RNF14Q9UBS8 474 aa18.27■□□□□ 0.51
SMARCB1-204ENST00000407422 A0A1W2PQ72 361 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 H0YIG0 161 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 SGK494L7N484 410 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 AGFG2O95081 481 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 NSA2O95478 260 aaKnown RBP18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 PRR35P0CG20 571 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 ZNF37AP17032 561 aaPredicted RBP18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 ISLR2Q6UXK2 745 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 CAPN12Q6ZSI9 719 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 ASPGQ86U10 573 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 PDSS2Q86YH6 399 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 ZBED8Q8IZ13 594 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 CAMKVQ8NCB2 501 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 ABHD11Q8NFV4 315 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 BRIX1Q8TDN6 353 aaKnown RBP18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 SLC13A3Q8WWT9 602 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 FBXL8Q96CD0 374 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 PDLIM5Q96HC4 596 aaKnown RBP18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 CNDP1Q96KN2 507 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 HAUS8Q9BT25 410 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 TRIM54Q9BYV2 358 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 EPS8L2Q9H6S3 715 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 HCN3Q9P1Z3 774 aa18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 COPG1Q9Y678 874 aaKnown RBP18.26■□□□□ 0.51
SMARCB1-204ENST00000407422 POLEQ07864 2286 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms