RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 HOXA11P31270 313 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 CLK1P49759 484 aaKnown RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 VAMP7P51809 220 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 NME5P56597 212 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 AKAP17AQ02040 695 aaKnown RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 DMPKQ09013 629 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 HNRNPA0Q13151 305 aaKnown RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF260Q3ZCT1 412 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 AARDQ4LEZ3 155 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 IFI44LQ53G44 452 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 PARP10Q53GL7 1025 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 SIRPB2Q5JXA9 342 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 LYSMD4Q5XG99 296 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 OR4A47Q6IF82 309 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 CORO6Q6QEF8 472 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 NHLRC1Q6VVB1 395 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 KCTD8Q6ZWB6 473 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 TUBA1AQ71U36 451 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 PLD3Q8IV08 490 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 ITPRIPQ8IWB1 547 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 MMD2Q8IY49 270 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF619Q8N2I2 560 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF441Q8N8Z8 693 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 CCDC63Q8NA47 563 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 OR2T12Q8NG77 320 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 OR1J1Q8NGS3 322 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF473Q8WTR7 871 aaKnown RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 SECTM1Q8WVN6 248 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 BCL2L2Q92843 193 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 TSACCQ96A04 125 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 AP2M1Q96CW1 435 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 C5orf30Q96GV9 206 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 FAM20AQ96MK3 541 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 C17orf77Q96MU5 243 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF778Q96MU6 729 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 C17orf62Q9BQA9 187 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 TUBA1CQ9BQE3 449 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 RTP3Q9BQQ7 232 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 URM1Q9BTM9 101 aaKnown RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 NAPBQ9H115 298 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 TNMDQ9H2S6 317 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 FGF21Q9NSA1 209 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 ECHDC1Q9NTX5 307 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 HMG20BQ9P0W2 317 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 MAD2L2Q9UI95 211 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 GMEB2Q9UKD1 530 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 APPL1Q9UKG1 709 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 KIF13AQ9H1H9 1805 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 MAP3K19Q56UN5 1328 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 PIK3R4Q99570 1358 aa4.4□□□□□ -1.7
HMGB3P18-201ENST00000406327 OVOS2A0A0J9YW53 1432 aa4.4□□□□□ -1.7
HMGB3P18-201ENST00000406327 OVOS2Q6IE36 1432 aa4.4□□□□□ -1.7
HMGB3P18-201ENST00000406327 A0A0B4J203 849 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 C2orf81A6NN90 581 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 SRRM3A6NNA2 597 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC28A2O43868 658 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRAF2O60831 178 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 CTSVO60911 334 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 ATP9AO75110 1047 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 TYMPP19971 482 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 CYP2A7P20853 494 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 TNFRSF8P28908 595 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 GLIPR1P48060 266 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 FUT6P51993 359 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZNF415Q09FC8 603 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 KIF5AQ12840 1032 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 NONOQ15233 471 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 MAPK11Q15759 364 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 FAM46CQ5VWP2 391 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 FUT10Q6P4F1 479 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 GPR141Q7Z602 305 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 ERC1Q8IUD2 1116 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 TMEM139Q8IV31 216 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 KLHDC8AQ8IYD2 350 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 PHLDA1Q8WV24 401 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 IGSF21Q96ID5 467 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 API5Q9BZZ5 524 aaKnown RBP4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 SDCBP2Q9H190 292 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 ABCG8Q9H221 673 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 S1PR5Q9H228 398 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRMT8Q9NR22 394 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 GPR173Q9NS66 373 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 ANO10Q9NW15 660 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 HOOK1Q9UJC3 728 aaKnown RBP4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 RUVBL2Q9Y230 463 aaKnown RBP4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 UBR1Q8IWV7 1749 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 LRRC7Q96NW7 1537 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 SBNO1A3KN83 1393 aa4.4□□□□□ -1.71
HMGB3P18-201ENST00000406327 KNDC1Q76NI1 1749 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 RNF103-CHMP3A0A140T963 221 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 SYCE3A1L190 88 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 SMIM30A4D0T7 59 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 LACTBL1A8MY62 500 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 NPIPA3F8WFD2 350 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 RNF103O00237 685 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 SEC22BO75396 215 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRDM1O75626 825 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 AKAP3O75969 853 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms