RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 EPHX1P07099 455 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 ZBTB48P10074 688 aaPredicted RBP12.97□□□□□ -0.33
SNED1-205ENST00000405547 ATP1B2P14415 290 aaPredicted RBP12.97□□□□□ -0.33
SNED1-205ENST00000405547 MYLK3Q32MK0 819 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 KBTBD6Q86V97 674 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 RNF38Q9H0F5 515 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 SIX4Q9UIU6 781 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 ABCG2Q9UNQ0 655 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 CSKP41240 450 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 DGKGP49619 791 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 ST3GAL3Q11203 375 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 COQ5Q5HYK3 327 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 PRAMEF14Q5SWL7 426 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 PRAMEF13Q5VWM6 474 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 GDPD4Q6W3E5 623 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 SLC22A18Q96BI1 424 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 TMED9Q9BVK6 235 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 LYARQ9NX58 379 aaKnown RBP12.97□□□□□ -0.33
SNED1-205ENST00000405547 ZNF639Q9UID6 485 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
SNED1-205ENST00000405547 ANKDD1AQ495B1 522 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 GALNTL5Q7Z4T8 443 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 GPR151Q8TDV0 419 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 C1orf74Q96LT6 269 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 BTBD1Q9H0C5 482 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 TBX18O95935 607 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 RENP00797 406 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 APOC1P02654 83 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 KLK1P06870 262 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 GSTT2P0CG29 244 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 CSNK2A2P19784 350 aaPredicted RBP12.97□□□□□ -0.33
SNED1-205ENST00000405547 ERP29P30040 261 aaKnown RBP12.97□□□□□ -0.33
SNED1-205ENST00000405547 SIX1Q15475 284 aaPredicted RBP12.97□□□□□ -0.33
SNED1-205ENST00000405547 REEP3Q6NUK4 255 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 OR2L5Q8NG80 312 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 NFKBIDQ8NI38 313 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 CD180Q99467 661 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 PTPN18Q99952 460 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 XYLT2Q9H1B5 865 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 MS4A12Q9NXJ0 267 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 KANTRA0A1W2PQU2 76 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 I3L521 148 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 PRLP01236 227 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 RB1P06400 928 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 MYF6P23409 242 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 NIPAL4Q0D2K0 466 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 SCRN3Q0VDG4 424 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 FAM189A2Q15884 450 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 ASB18Q6ZVZ8 466 aa12.97□□□□□ -0.33
SNED1-205ENST00000405547 BCHEP06276 602 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 MAGEA2P43356 314 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 HLCSP50747 726 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 RPL6Q02878 288 aaKnown RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 ZNF367Q7RTV3 350 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 ZNF675Q8TD23 568 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 LRCH3Q96II8 777 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 NSUN3Q9H649 340 aaKnown RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 MKKSQ9NPJ1 570 aaPredicted RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 NLE1Q9NVX2 485 aaPredicted RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 UCKL1Q9NWZ5 548 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 MGAT4BQ9UQ53 548 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 MAU2Q9Y6X3 613 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 A0A096LPI6 279 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 TLX2O43763 284 aaPredicted RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 NRIP1P48552 1158 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 MEDAGQ5VYS4 303 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 TPGS2Q68CL5 300 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 SCML4Q8N228 414 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 C12orf66Q96MD2 445 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 MAGIXQ9H6Y5 334 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 TJP1Q07157 1748 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 CHRNA1P02708 482 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 ZNF823P16415 610 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 RFC2P35250 354 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 TAS2R43P59537 309 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 CTC1Q2NKJ3 1217 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 ULK3Q6PHR2 472 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 SIPA1Q96FS4 1042 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 LMLNQ96KR4 655 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 ZDHHC4Q9NPG8 344 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 NUP50Q9UKX7 468 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 MGAT4AQ9UM21 535 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 HSPB11Q9Y547 144 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 TIAM2Q8IVF5 1701 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 DFNA5O60443 496 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 ZNF280AP59817 542 aaPredicted RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 DSG2Q14126 1118 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 FCRL3Q96P31 734 aaPredicted RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 MYOCQ99972 504 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 RETREG1Q9H6L5 497 aa12.96□□□□□ -0.33
SNED1-205ENST00000405547 PHRF1Q9P1Y6 1649 aaKnown RBP12.96□□□□□ -0.33
SNED1-205ENST00000405547 CCL16O15467 120 aa12.96□□□□□ -0.34
SNED1-205ENST00000405547 DIRAS1O95057 198 aa12.96□□□□□ -0.34
SNED1-205ENST00000405547 F7P08709 466 aaPredicted RBP12.96□□□□□ -0.34
SNED1-205ENST00000405547 THOC6Q86W42 341 aaKnown RBP12.96□□□□□ -0.34
SNED1-205ENST00000405547 FAM129CQ86XR2 697 aa12.96□□□□□ -0.34
SNED1-205ENST00000405547 DUS2Q9NX74 493 aaKnown RBP12.96□□□□□ -0.34
SNED1-205ENST00000405547 HSPE1-MOB4S4R3N1 261 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms