RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 AIF1LQ9BQI0 150 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 SPRTNQ9H040 489 aaPredicted RBP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 STARD5Q9NSY2 213 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 PLCL2Q9UPR0 1127 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 PCDHGA4Q9Y5G9 962 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 TRBC2A0A5B9 178 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 TMEM150CB9EJG8 249 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 MAP3K7O43318 606 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 ITM2AO43736 263 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 OR4F21O95013 312 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 TIAF1O95411 115 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 MLYCDO95822 493 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 TBX6O95947 436 aaPredicted RBP15.24■□□□□ 0.03
HMGA1-204ENST00000401473 OTCP00480 354 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 STATHP02808 62 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 GRK3P35626 688 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 SCTRP47872 440 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 VSX2P58304 361 aaPredicted RBP15.24■□□□□ 0.03
HMGA1-204ENST00000401473 SHC2P98077 582 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 ACY1Q03154 408 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 EIF3IQ13347 325 aaKnown RBP15.24■□□□□ 0.03
HMGA1-204ENST00000401473 RBBP5Q15291 538 aaKnown RBP15.24■□□□□ 0.03
HMGA1-204ENST00000401473 ARL13AQ5H913 290 aaPredicted RBP15.24■□□□□ 0.03
HMGA1-204ENST00000401473 ZNF285Q96NJ3 590 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 ZNF382Q96SR6 550 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 EFCAB11Q9BUY7 163 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 AKAP7Q9P0M2 348 aaPredicted RBP15.24■□□□□ 0.03
HMGA1-204ENST00000401473 PISDQ9UG56 409 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 MSRB2Q9Y3D2 182 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 NEUROG3Q9Y4Z2 214 aa15.24■□□□□ 0.03
HMGA1-204ENST00000401473 APC2O95996 2303 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 ACACAQ13085 2346 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 TRABD2BA6NFA1 517 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 B4E171 279 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 POLR1CO15160 346 aaPredicted RBP15.23■□□□□ 0.03
HMGA1-204ENST00000401473 SRPX2O60687 465 aaPredicted RBP15.23■□□□□ 0.03
HMGA1-204ENST00000401473 UGDHO60701 494 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 H2AFYO75367 372 aaKnown RBP15.23■□□□□ 0.03
HMGA1-204ENST00000401473 JMJD7P0C870 316 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 ARL1P40616 181 aaPredicted RBP15.23■□□□□ 0.03
HMGA1-204ENST00000401473 TSPAN7P41732 249 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 ATP1A2P50993 1020 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 MAPK10P53779 464 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 FOXA1P55317 472 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 RPS15AP62244 130 aaKnown RBP15.23■□□□□ 0.03
HMGA1-204ENST00000401473 WASHC2DQ5SRD0 308 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 GRHL2Q6ISB3 625 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 VN1R5Q7Z5H4 357 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 RNF175Q8N4F7 328 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 OR7G3Q8NG95 312 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 AGAP11Q8TF27 550 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 TM4SF19Q96DZ7 209 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 DRC3Q9H069 523 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 MID1IP1Q9NPA3 183 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 SLC39A1Q9NY26 324 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 B3GALT1Q9Y5Z6 326 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 SDK2Q58EX2 2172 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 P2RX6O15547 441 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 NPHS1O60500 1241 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 EIF2S1P05198 315 aaKnown RBP15.23■□□□□ 0.03
HMGA1-204ENST00000401473 FGF5P12034 268 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 HNF4AP41235 474 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 NEK2P51955 445 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 ASPHQ12797 758 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 IL11RAQ14626 422 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 HKDC1Q2TB90 917 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 PWWP2BQ6NUJ5 590 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 LAS2Q8IYD9 372 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 MFSD9Q8NBP5 474 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 SLC46A1Q96NT5 459 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 KCNA7Q96RP8 456 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 NT5DC2Q9H857 520 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 POLR1BQ9H9Y6 1135 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 ZFP69BQ9UJL9 534 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 SERTAD3Q9UJW9 196 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 PCDHGA8Q9Y5G5 932 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 AP1M2Q9Y6Q5 423 aa15.23■□□□□ 0.03
HMGA1-204ENST00000401473 ACACBO00763 2458 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 C9orf172C9J069 976 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 H0YIV9 168 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 LYPLA1O75608 230 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-204ENST00000401473 ESRRBO95718 433 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 SERPINE1P05121 402 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 CXCR2P25025 360 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 NAA20P61599 178 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 RCN2Q14257 317 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 ZRSR2Q15696 482 aaKnown RBP15.22■□□□□ 0.03
HMGA1-204ENST00000401473 PAGE2BQ5JRK9 111 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 TCHHL1Q5QJ38 904 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-204ENST00000401473 MED27Q6P2C8 311 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 GPRIN3Q6ZVF9 776 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 PPP1R3BQ86XI6 285 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.22■□□□□ 0.03
HMGA1-204ENST00000401473 KRT78Q8N1N4 520 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 CDYL2Q8N8U2 506 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 SLC38A9Q8NBW4 561 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 WDR20Q8TBZ3 569 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 CREB3L4Q8TEY5 395 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 SLC13A3Q8WWT9 602 aa15.22■□□□□ 0.03
HMGA1-204ENST00000401473 N4BP2L2Q92802 583 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms