RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 ARL10Q8N8L6 244 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 FIBINQ8TAL6 211 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 AP2M1Q96CW1 435 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 XKR8Q9H6D3 395 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 FZD4Q9ULV1 537 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 RBMX2Q9Y388 322 aaKnown RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TRBV23OR9-2A0A075B6M9 112 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 KRT6AP02538 564 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 KRT6BP04259 564 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 EBLN1P0CF75 366 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 CEBPBP17676 345 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 HOXD10P28358 340 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 RRM2P31350 389 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 KRT6CP48668 564 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ADPRMQ3LIE5 342 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 RAVER1Q8IY67 606 aaKnown RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TCEAL8Q8IYN2 117 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ASAH2Q9NR71 780 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 KCTD5Q9NXV2 234 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ASXL3Q9C0F0 2248 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TRAV19A0A0A6YYK7 116 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 LINC00854A0A1B0GVQ3 168 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TMEM247A6NEH6 219 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 SCN2BO60939 215 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 VPS4BO75351 444 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ANGPTL1O95841 491 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 KLK1P06870 262 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 CTSAP10619 480 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TIMP2P16035 220 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 MSH3P20585 1137 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 GRK5P34947 590 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 GRAMD4Q6IC98 578 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 C16orf87Q6PH81 154 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF784Q8NCA9 323 aaPredicted RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 PIK3C3Q8NEB9 887 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 OR7G3Q8NG95 312 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 OR5AR1Q8NGP9 310 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 UTP15Q8TED0 518 aaKnown RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TPT1P8Q9HAU6 139 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ZBTB20Q9HC78 741 aaPredicted RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 SLC23A2Q9UGH3 650 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 BAG5Q9UL15 447 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 PLEKHM1Q9Y4G2 1056 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 NBEAQ8NFP9 2946 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF189O75820 626 aaPredicted RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 SDHBP21912 280 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ACSM2AQ08AH3 577 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TMEM115Q12893 351 aaPredicted RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 CDK5R2Q13319 367 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ACSM2BQ68CK6 577 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 MMAAQ8IVH4 418 aaKnown RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF480Q8WV37 535 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 TMEM175Q9BSA9 504 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 QRSL1Q9H0R6 528 aaKnown RBP11.32□□□□□ -0.6
ITSN1-211ENST00000399355 SPASTQ9UBP0 616 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 OR1A2Q9Y585 309 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
ITSN1-211ENST00000399355 LOC100506127A0A0U1RQW1 187 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 TMEM229AB2RXF0 380 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 ALDH1A1P00352 501 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 OR56A5P0C7T3 313 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 XPAP23025 273 aaPredicted RBP11.31□□□□□ -0.6
ITSN1-211ENST00000399355 HLCSP50747 726 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 TBPL1P62380 186 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 DSG4Q86SJ6 1040 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 PAPD5Q8NDF8 572 aaKnown RBP11.31□□□□□ -0.6
ITSN1-211ENST00000399355 OR13F1Q8NGS4 319 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 STON2Q8WXE9 905 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 DNASE1L2Q92874 299 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 GLMNQ92990 594 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 PYURFQ96I23 114 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 NTMT1Q9BV86 223 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 TMEM165Q9HC07 324 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 TDP1Q9NUW8 608 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 ELFN1P0C7U0 828 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 KRT20P35900 424 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 SEPHS1P49903 392 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 MPPE1Q53F39 396 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 PAGE2BQ5JRK9 111 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF540Q8NDQ6 660 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 IRF7Q92985 503 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 FCRL4Q96PJ5 515 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 SMAD5Q99717 465 aaKnown RBP11.31□□□□□ -0.6
ITSN1-211ENST00000399355 OSBPL6Q9BZF3 934 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 DNAJB9Q9UBS3 223 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 OLFM2O95897 454 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 OPRD1P41143 372 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 CDH12P55289 794 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 ABHD18Q0P651 414 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 SLC13A2Q13183 592 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 PROSER1Q86XN7 944 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF547Q8IVP9 402 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 CCDC103Q8IW40 242 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 DNAJC11Q9NVH1 559 aa11.31□□□□□ -0.6
ITSN1-211ENST00000399355 DNAAF2Q9NVR5 837 aaKnown RBP11.31□□□□□ -0.6
ITSN1-211ENST00000399355 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
ITSN1-211ENST00000399355 GPR83Q9NYM4 423 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms