RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ACVR2AP27037 513 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 APOBEC3AP31941 199 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 THBS2P35442 1172 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 RAP1GAPP47736 663 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 EIF1AXP47813 144 aaKnown RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 NUP107P57740 925 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 PPP1R3AQ16821 1122 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 Q5PR19 223 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 TIFABQ6ZNK6 161 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CDHR3Q6ZTQ4 885 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 MISPQ8IVT2 679 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 EDAQ92838 391 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 S100PBPQ96BU1 408 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 RTP4Q96DX8 246 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ERLEC1Q96DZ1 483 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM120BQ96EK7 910 aaKnown RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 NAT9Q9BTE0 207 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 KIFC1Q9BW19 673 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 GPR63Q9BZJ6 419 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 TRPC4Q9UBN4 977 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 APOBEC3BQ9UH17 382 aaKnown RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ADAMTS6Q9UKP5 1117 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 PCDHA11Q9Y5I1 949 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ST14Q9Y5Y6 855 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 KCNE2Q9Y6J6 123 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 DNAH14Q0VDD8 3507 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 COL11A1P12107 1806 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 A8MV72 311 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 PTGES3LE9PB15 166 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ACKR2O00590 384 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 MSCO60682 206 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 AMHP03971 560 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 TP53P04637 393 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 HOXC6P09630 235 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ERCC2P18074 760 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 GPX4P36969 197 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 FDFT1P37268 417 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 YPEL5P62699 121 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 UBAP2LQ14157 1087 aaKnown RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 TRIP10Q15642 601 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 HNRNPA1L2Q32P51 320 aaKnown RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 USP41Q3LFD5 358 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 TEX44Q53QW1 395 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 DCAF6Q58WW2 860 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 RABGAP1LQ5R372 815 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CYP4Z1Q86W10 505 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 AHI1Q8N157 1196 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM172AQ8WUF8 416 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 PIK3R3Q92569 461 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 UFD1Q92890 307 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CCDC124Q96CT7 223 aaKnown RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 AP2M1Q96CW1 435 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ALG14Q96F25 216 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 LRIG1Q96JA1 1093 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CLPTM1LQ96KA5 538 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF48Q96MX3 618 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF670Q9BS34 389 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 METTL7AQ9H8H3 244 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 MYOZ1Q9NP98 299 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ADAM28Q9UKQ2 775 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 PLA2G4CQ9UP65 541 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CDY2AQ9Y6F7 541 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CDY1Q9Y6F8 540 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ARID2Q68CP9 1835 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 SMIM30A4D0T7 59 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 SDR42E2A6NKP2 422 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM159BA6NKW6 160 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 OR2AT4A6NND4 320 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CXorf49A8MYA2 514 aaPredicted RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 NPIPB8E9PQR5 432 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CYB561D2O14569 222 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 PLD2O14939 933 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 AKAP8O43823 692 aaKnown RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 EPOP01588 193 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CLEC2LP0C7M8 214 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 UQCRBP14927 111 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CTSSP25774 331 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 MAGEA6P43360 314 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 YAP1P46937 504 aaKnown RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 DGKEP52429 567 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTBP60709 375 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTA2P62736 377 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTG1P63261 375 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTG2P63267 376 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTC1P68032 377 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTA1P68133 377 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CNTN2Q02246 1040 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 LAMTOR4Q0VGL1 99 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 KCNMB1Q16558 191 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 HSF5Q4G112 596 aaPredicted RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 ACER2Q5QJU3 275 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 N4BP2L1Q5TBK1 243 aaPredicted RBP6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 CLEC6AQ6EIG7 209 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 KCNE4Q8WWG9 221 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM41AQ96HV5 264 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 WNK4Q96J92 1243 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 APOLD1Q96LR9 279 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 FOPNLQ96NB1 174 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 SNX18Q96RF0 628 aa6.38□□□□□ -1.39
TM9SF4-202ENST00000398022 RAB33BQ9H082 229 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms