RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GSTA3Q16772 222 aa26.35■■□□□ 1.81
CPNE1-203ENST00000397442 LACTB2Q53H82 288 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-203ENST00000397442 FCRL6Q6DN72 434 aa26.35■■□□□ 1.81
CPNE1-203ENST00000397442 C11orf24Q96F05 449 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-203ENST00000397442 BRINP2Q9C0B6 783 aa26.35■■□□□ 1.81
CPNE1-203ENST00000397442 ABCG4Q9H172 646 aa26.35■■□□□ 1.81
CPNE1-203ENST00000397442 ADGRE2Q9UHX3 823 aa26.35■■□□□ 1.81
CPNE1-203ENST00000397442 MDC1Q14676 2089 aaKnown RBP26.35■■□□□ 1.81
CPNE1-203ENST00000397442 LY6G6EA0A0G2JKS1 128 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 AMD1P17707 334 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 ENGP17813 658 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 GPX3P22352 226 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 PIK3R1P27986 724 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 NAA25Q14CX7 972 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 IL23RQ5VWK5 629 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 KLHL35Q6PF15 583 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 ASIC5Q9NY37 505 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 RAB23Q9ULC3 237 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 U3KQA8 63 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 A0A0J9YY10 115 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 SH3BGRLO75368 114 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 TGFB1P01137 390 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 TBL3Q12788 808 aaKnown RBP26.34■■□□□ 1.81
CPNE1-203ENST00000397442 NR1D2Q14995 579 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 ARMC6Q6NXE6 501 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 FIGLAQ6QHK4 219 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 FCRL1Q96LA6 429 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 GTPBP2Q9BX10 602 aaKnown RBP26.34■■□□□ 1.81
CPNE1-203ENST00000397442 NOP53Q9NZM5 478 aaKnown RBP26.34■■□□□ 1.81
CPNE1-203ENST00000397442 PADI4Q9UM07 663 aa26.34■■□□□ 1.81
CPNE1-203ENST00000397442 POLR3HQ9Y535 204 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-203ENST00000397442 ANKDD1BA6NHY2 528 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 SIGLEC6O43699 453 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 PCDHGA12O60330 932 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 ALPPL2P10696 532 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 PVRP15151 417 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 SERPINB1P30740 379 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 GRK3P35626 688 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 CYP4F2P78329 520 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 CREB3L4Q8TEY5 395 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 APOLD1Q96LR9 279 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 MRPL1Q9BYD6 325 aaKnown RBP26.33■■□□□ 1.81
CPNE1-203ENST00000397442 KLHL25Q9H0H3 589 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 OR51B5Q9H339 312 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 MRGBPQ9NV56 204 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 ANKMY1Q9P2S6 941 aa26.33■■□□□ 1.81
CPNE1-203ENST00000397442 G6PDP11413 515 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 IRX1P78414 480 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-203ENST00000397442 PHEXP78562 749 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 MAD2L1Q13257 205 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-203ENST00000397442 LAIR1Q6GTX8 287 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 FAM181AQ8N9Y4 354 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 OR9I1Q8NGQ6 314 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 CHTF18Q8WVB6 975 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 ZUFSPQ96AP4 578 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 NSL1Q96IY1 281 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 MS4A8Q9BY19 250 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 DLGAP4Q9Y2H0 992 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 PCDHGA4Q9Y5G9 962 aa26.32■■□□□ 1.8
CPNE1-203ENST00000397442 PSMD12O00232 456 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-203ENST00000397442 KHNYNO15037 678 aaKnown RBP26.31■■□□□ 1.8
CPNE1-203ENST00000397442 ZW10O43264 779 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 PRAMEF10O60809 474 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 CTSVO60911 334 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 KIAA0754O94854 1291 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 ALDH4A1P30038 563 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 GPR3P46089 330 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 OR1D5P58170 312 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 STX1BP61266 288 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 ZIC1Q15915 447 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 FBXO42Q6P3S6 717 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 PAOXQ6QHF9 649 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 MIER2Q8N344 545 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 MINDY1Q8N5J2 469 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 MFSD9Q8NBP5 474 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 BAHD1Q8TBE0 780 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-203ENST00000397442 METTL2AQ96IZ6 378 aaKnown RBP26.31■■□□□ 1.8
CPNE1-203ENST00000397442 SLC45A3Q96JT2 553 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 SERPINI1Q99574 410 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 ACTL8Q9H568 366 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 PILRAQ9UKJ1 303 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 TMED5Q9Y3A6 229 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 AP1M2Q9Y6Q5 423 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 IGHV1OR21-1A0A087WYE8 117 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 ANKRD28O15084 1053 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 UNC5CO95185 931 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 EZRP15311 586 aaKnown RBP26.31■■□□□ 1.8
CPNE1-203ENST00000397442 PTX3P26022 381 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-203ENST00000397442 AHRP35869 848 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 ACADVLP49748 655 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 NME5P56597 212 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 CUL3Q13618 768 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 PDCD4Q53EL6 469 aaKnown RBP26.31■■□□□ 1.8
CPNE1-203ENST00000397442 CYP20A1Q6UW02 462 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 FUNDC1Q8IVP5 155 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 POU5F2Q8N7G0 328 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 TTLQ8NG68 377 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 TEX37Q96LM6 180 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 FCRL4Q96PJ5 515 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 RAB33BQ9H082 229 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms