RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 AMZ2Q86W34 360 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 GPR151Q8TDV0 419 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 PRRG4Q9BZD6 226 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 TM9SF3Q9HD45 589 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 A0A1W2PRQ8 180 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 LCHNA4D1U4 455 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 CCL16O15467 120 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 RASGRP1O95267 797 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 RPS3P23396 243 aaKnown RBP eCLIP9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 HTR2AP28223 471 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 AVPR1BP47901 424 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 DNAJB13P59910 316 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 UFM1P61960 85 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 OGDHQ02218 1023 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 EMX2Q04743 252 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 NFE2L1Q14494 772 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF423Q2M1K9 1284 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 ANKDD1AQ495B1 522 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 MINDY4Q4G0A6 757 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 LRRN1Q6UXK5 716 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 OR5T3Q8NGG3 340 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 OR9I1Q8NGQ6 314 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 TBC1D15Q8TC07 691 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 TWNKQ96RR1 684 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 SEC14L4Q9UDX3 406 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 GNG8Q9UK08 70 aa9.98□□□□□ -0.81
LIMCH1-203ENST00000396595 RIMS1Q86UR5 1692 aaKnown RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 TLL1O43897 1013 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 APOC3P02656 99 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 SMPD1P17405 629 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 CCR8P51685 355 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 GALNT2Q10471 571 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 XKR5Q6UX68 686 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 IQCHQ86VS3 1027 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 FAM129CQ86XR2 697 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ARMC10Q8N2F6 343 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF676Q8N7Q3 588 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 MTMR14Q8NCE2 650 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 OR2L3Q8NG85 312 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 KIAA1191Q96A73 305 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 C12orf42Q96LP6 360 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RNF6Q9Y252 685 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 TRBV23OR9-2A0A075B6M9 112 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF487B1APH4 448 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ITGB1P05556 798 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 CFHP08603 1231 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RAB4AP20338 218 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 GLDCP23378 1020 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 LCN1P31025 176 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 TRIM23P36406 574 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 OR3A3P47888 321 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 OR3A2P47893 321 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RASGEF1BQ0VAM2 473 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 XKR4Q5GH76 650 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ASB18Q6ZVZ8 466 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 C1orf52Q8N6N3 182 aaKnown RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 OR7G2Q8NG99 324 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 PYCR2Q96C36 320 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 SLC30A2Q9BRI3 323 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RGCCQ9H4X1 137 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 MRM3Q9HC36 420 aaKnown RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF334Q9HCZ1 680 aaPredicted RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 MRPS30Q9NP92 439 aaKnown RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ADAP2Q9NPF8 381 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ZDHHC4Q9NPG8 344 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 MANBAO00462 879 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 FBP2O00757 339 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 POLR1CO15160 346 aaPredicted RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 OR1I1O60431 355 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 SNAP29O95721 258 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 CDKN2CP42773 168 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 NUDT6P53370 316 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF630Q2M218 657 aaPredicted RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 KIAA1614Q5VZ46 1190 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 FOXRED2Q8IWF2 684 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 OR4F6Q8NGB9 312 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 AUTS2Q8WXX7 1259 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RPL10LQ96L21 214 aaKnown RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 LURAP1Q96LR2 239 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 SUV39H2Q9H5I1 410 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RCBTB2O95199 551 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 OPN1SWP03999 348 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 CLCN7P51798 805 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RABGGTBP53611 331 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RPS24P62847 133 aaKnown RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 VLDLRP98155 873 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 CARD16Q5EG05 197 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF425Q6IV72 752 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 FBXL22Q6P050 247 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 WFIKKN2Q8TEU8 576 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 SLC35F5Q8WV83 523 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RIT1Q92963 219 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 RGMAQ96B86 450 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 TBX5Q99593 518 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 TRIM36Q9NQ86 728 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 PCDHGB6Q9Y5F9 930 aa9.97□□□□□ -0.81
LIMCH1-203ENST00000396595 CDC7O00311 574 aa9.96□□□□□ -0.81
LIMCH1-203ENST00000396595 DNAJB5O75953 348 aa9.96□□□□□ -0.81
LIMCH1-203ENST00000396595 VNN2O95498 520 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms