RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TCRBV5S2A0A599 114 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 CCDC78A2IDD5 438 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 A6NJY4 79 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 A8MV72 311 aaPredicted RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 SLC28A1O00337 649 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 AZIN1O14977 448 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 PER2O15055 1255 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ADH1BP00325 375 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 MT-CO1P00395 513 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 OTCP00480 354 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SNRPB2P08579 225 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 PSMA4P25789 261 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 ACADLP28330 430 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 OXTRP30559 389 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 AVPR1AP37288 418 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 GP2P55259 537 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 COPZ1P61923 177 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ITKQ08881 620 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 HSPA14Q0VDF9 509 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ABRQ12979 859 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 BNIP2Q12982 314 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 GPM6BQ13491 265 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 INPP5AQ14642 412 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 PLCL1Q15111 1095 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 GEN1Q17RS7 908 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ZNF181Q2M3W8 571 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 CDONQ4KMG0 1287 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 FAM78AQ5JUQ0 283 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 NXNQ6DKJ4 435 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 PAQR3Q6TCH7 311 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 PRSS48Q7RTY5 328 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SERPINA9Q86WD7 417 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 GRAMD2AQ8IUY3 354 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 LAS2Q8IYD9 372 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 FAM169BQ8N8A8 192 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 LPCAT1Q8NF37 534 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 OR8J3Q8NGG0 315 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 DYNC2LI1Q8TCX1 351 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SETD7Q8WTS6 366 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 ELMO1Q92556 727 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 DACT3Q96B18 629 aaPredicted RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 OMA1Q96E52 524 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 MUS81Q96NY9 551 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 DHRS9Q9BPW9 319 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 APOL2Q9BQE5 337 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TRIM15Q9C019 465 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 NSUN3Q9H649 340 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 C12orf4Q9NQ89 552 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ACSS2Q9NR19 701 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ACTR3BQ9P1U1 418 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 GMPR2Q9P2T1 348 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 TRMT6Q9UJA5 497 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 PCOLCE2Q9UKZ9 415 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TMCC3Q9ULS5 477 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 YBX2Q9Y2T7 364 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 SPEF1Q9Y4P9 236 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 PCDHGB1Q9Y5G3 927 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 FAM234BA2RU67 622 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 NME4O00746 187 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 MRASO14807 208 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 NRP2O60462 931 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SUPT7LO94864 414 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 PRAMEF1O95521 474 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 PTTG1O95997 202 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 GSNP06396 782 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 GPIP06744 558 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 GUSBP08236 651 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 GFAPP14136 432 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 ATP1B2P14415 290 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 EPCAMP16422 314 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 GRK3P35626 688 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 MTHFRP42898 656 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 RGS19P49795 217 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SLC7A2P52569 658 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 LBX1P52954 281 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 NAGLUP54802 743 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 EEFSECP57772 596 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 GALK2Q01415 458 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 FASTKQ14296 549 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 CDK10Q15131 360 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 DGUOKQ16854 277 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 ADPRMQ3LIE5 342 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CEP78Q5JTW2 689 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CFAP161Q6P656 301 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SYCE2Q6PIF2 218 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 LIPIQ6XZB0 460 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 MED25Q71SY5 747 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 R3HCC1LQ7Z5L2 792 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 ZFAND4Q86XD8 727 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 RIMKLAQ8IXN7 391 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 OR6F1Q8NGZ6 308 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 GOT1L1Q8NHS2 421 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 SH3KBP1Q96B97 665 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 TCEAL4Q96EI5 215 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CRELD1Q96HD1 420 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 ZSWIM3Q96MP5 696 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 MENTQ9BUN1 341 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 RBCK1Q9BYM8 510 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 TRIM8Q9BZR9 551 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SOX17Q9H6I2 414 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms