RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 CD27P26842 260 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 NDUFS1P28331 727 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 PTPN6P29350 595 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ACTR1BP42025 376 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 CLNS1AP54105 237 aaKnown RBP12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ACTR1AP61163 376 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ACSM2AQ08AH3 577 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 KRT33BQ14525 404 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 RCN1Q15293 331 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 UGT8Q16880 541 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 FAM174BQ3ZCQ3 159 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 C6orf10Q5SRN2 563 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ACSM2BQ68CK6 577 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 SLC30A9Q6PML9 568 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ADGRF3Q8IZF5 1079 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 FAM9CQ8IZT9 166 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 RAB42Q8N4Z0 105 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 C1orf216Q8TAB5 229 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 DNAJB14Q8TBM8 379 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 SLC13A3Q8WWT9 602 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 SH3KBP1Q96B97 665 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ASB9Q96DX5 294 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 KLHDC7BQ96G42 594 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 AIF1LQ9BQI0 150 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 PAIP1Q9H074 479 aaKnown RBP12.88□□□□□ -0.35
CLIC1-209ENST00000395892 PCDHAC1Q9H158 963 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 SLC6A20Q9NP91 592 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ADGRE2Q9UHX3 823 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ERVK-11Q9UQG0 969 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 BTBD3Q9Y2F9 522 aa12.88□□□□□ -0.35
CLIC1-209ENST00000395892 ARHGEF17Q96PE2 2063 aaPredicted RBP12.88□□□□□ -0.35
CLIC1-209ENST00000395892 FEZF1A0PJY2 475 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 BTN3A3O00478 584 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 CELA2BP08218 269 aaPredicted RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 CHRM5P08912 532 aaPredicted RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 ANPEPP15144 967 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 PRPS1L1P21108 318 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 CXCR2P25025 360 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 TIA1P31483 386 aaKnown RBP eCLIP12.87□□□□□ -0.358e-29■■■■■ 45.1
CLIC1-209ENST00000395892 ERFP50548 548 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 EEFSECP57772 596 aaKnown RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 UBE2IP63279 158 aaKnown RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 SLC34A1Q06495 639 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 SELPLGQ14242 412 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 RBBP5Q15291 538 aaKnown RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 TCEA2Q15560 299 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 ZIC1Q15915 447 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 FXNQ16595 210 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 SPIN4Q56A73 249 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 RUNDC3AQ59EK9 446 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 ZNF542PQ5EBM4 170 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 RABL3Q5HYI8 236 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 LRIF1Q5T3J3 769 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 DEPDC1Q5TB30 811 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 ZNF425Q6IV72 752 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 DHDDSQ86SQ9 333 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 DCP2Q8IU60 420 aaKnown RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 SFTPA2Q8IWL1 248 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 FAM20CQ8IXL6 584 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.87□□□□□ -0.354e-15■■■■■ 61.4
CLIC1-209ENST00000395892 MFSD2AQ8NA29 543 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 OR2L3Q8NG85 312 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 OR4E2Q8NGC2 313 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 CREB3L4Q8TEY5 395 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 ZFPM2Q8WW38 1151 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 NRG4Q8WWG1 115 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 JPH3Q8WXH2 748 aaPredicted RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 JADE3Q92613 823 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 COQ8BQ96D53 544 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 DUS3LQ96G46 650 aaKnown RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 OR52E6Q96RD3 313 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 CGREF1Q99674 301 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 SARGQ9BW04 601 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 MS4A8Q9BY19 250 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 ZNF717Q9BY31 904 aaPredicted RBP12.87□□□□□ -0.35
CLIC1-209ENST00000395892 TRIM8Q9BZR9 551 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 AICDAQ9GZX7 198 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 CD320Q9NPF0 282 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 TMEM184CQ9NVA4 438 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 NMRK1Q9NWW6 199 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 SLC25A37Q9NYZ2 338 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 TAAR2Q9P1P5 351 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 EML5Q05BV3 1969 aa12.87□□□□□ -0.35
CLIC1-209ENST00000395892 TRBC2A0A5B9 178 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 GABRR3A8MPY1 467 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 DFNA5O60443 496 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 DNAJA2O60884 412 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 MYO1DO94832 1006 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 LRATO95237 230 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 B3GALT4O96024 378 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 ANXA4P09525 319 aaPredicted RBP12.86□□□□□ -0.35
CLIC1-209ENST00000395892 TCN1P20061 433 aaPredicted RBP12.86□□□□□ -0.35
CLIC1-209ENST00000395892 S100A3P33764 101 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 SHMT2P34897 504 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 GSK3BP49841 420 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 GZMMP51124 257 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 ABATP80404 500 aa12.86□□□□□ -0.35
CLIC1-209ENST00000395892 SRSF11Q05519 484 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms